Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.61■□□□□ 0.41
PPP3CBP16298 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PPP3CBP16298 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PPP3CBP16298 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.61■□□□□ 0.41
PPP3CBP16298 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PPP3CBP16298 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.61■□□□□ 0.41
PPP3CBP16298 AC133681.1-201ENST00000465482 601 ntBASIC17.61■□□□□ 0.41
PPP3CBP16298 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.61■□□□□ 0.41
PPP3CBP16298 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.61■□□□□ 0.41
PPP3CBP16298 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.61■□□□□ 0.41
PPP3CBP16298 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 AC233263.1-201ENST00000578059 224 ntBASIC17.61■□□□□ 0.41
PPP3CBP16298 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.61■□□□□ 0.41
PPP3CBP16298 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 AC006557.6-201ENST00000623071 864 ntBASIC17.61■□□□□ 0.41
PPP3CBP16298 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.61■□□□□ 0.41
PPP3CBP16298 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
PPP3CBP16298 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPP3CBP16298 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPP3CBP16298 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPP3CBP16298 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PPP3CBP16298 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PPP3CBP16298 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PPP3CBP16298 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
PPP3CBP16298 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PPP3CBP16298 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPP3CBP16298 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.6■□□□□ 0.41
PPP3CBP16298 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.6■□□□□ 0.41
PPP3CBP16298 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPP3CBP16298 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.6■□□□□ 0.41
PPP3CBP16298 PRKY-204ENST00000533551 1019 ntBASIC17.6■□□□□ 0.41
PPP3CBP16298 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PPP3CBP16298 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PPP3CBP16298 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
PPP3CBP16298 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.6■□□□□ 0.41
PPP3CBP16298 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PPP3CBP16298 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPP3CBP16298 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.6■□□□□ 0.41
PPP3CBP16298 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PPP3CBP16298 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPP3CBP16298 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPP3CBP16298 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.6■□□□□ 0.41
PPP3CBP16298 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.6■□□□□ 0.41
PPP3CBP16298 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.6■□□□□ 0.41
PPP3CBP16298 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPP3CBP16298 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPP3CBP16298 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPP3CBP16298 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPP3CBP16298 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.59■□□□□ 0.41
PPP3CBP16298 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.59■□□□□ 0.41
PPP3CBP16298 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.59■□□□□ 0.41
PPP3CBP16298 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.59■□□□□ 0.41
PPP3CBP16298 AC239809.2-201ENST00000415381 517 ntBASIC17.59■□□□□ 0.41
PPP3CBP16298 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.59■□□□□ 0.41
PPP3CBP16298 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.59■□□□□ 0.41
PPP3CBP16298 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.59■□□□□ 0.41
PPP3CBP16298 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PPP3CBP16298 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
PPP3CBP16298 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PPP3CBP16298 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.59■□□□□ 0.41
PPP3CBP16298 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PPP3CBP16298 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.59■□□□□ 0.41
PPP3CBP16298 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PPP3CBP16298 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PPP3CBP16298 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
PPP3CBP16298 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
PPP3CBP16298 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PPP3CBP16298 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PPP3CBP16298 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PPP3CBP16298 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms