Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHRNA1P02708 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CHRNA1P02708 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHRNA1P02708 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHRNA1P02708 DUX4L26-201ENST00000489078 1255 ntBASIC21.48■■□□□ 1.03
CHRNA1P02708 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
CHRNA1P02708 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHRNA1P02708 BX119927.1-201ENST00000636596 1552 ntBASIC21.48■■□□□ 1.03
CHRNA1P02708 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHRNA1P02708 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CHRNA1P02708 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHRNA1P02708 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.47■■□□□ 1.03
CHRNA1P02708 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CHRNA1P02708 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHRNA1P02708 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.47■■□□□ 1.03
CHRNA1P02708 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHRNA1P02708 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHRNA1P02708 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHRNA1P02708 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.47■■□□□ 1.03
CHRNA1P02708 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHRNA1P02708 SLC25A1P4-201ENST00000567977 778 ntBASIC21.47■■□□□ 1.03
CHRNA1P02708 AC011298.2-201ENST00000617989 482 ntBASIC21.47■■□□□ 1.03
CHRNA1P02708 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHRNA1P02708 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHRNA1P02708 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.47■■□□□ 1.03
CHRNA1P02708 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHRNA1P02708 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CHRNA1P02708 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CHRNA1P02708 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.46■■□□□ 1.03
CHRNA1P02708 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.46■■□□□ 1.03
CHRNA1P02708 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.46■■□□□ 1.03
CHRNA1P02708 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CHRNA1P02708 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHRNA1P02708 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.46■■□□□ 1.03
CHRNA1P02708 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHRNA1P02708 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CHRNA1P02708 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
CHRNA1P02708 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.46■■□□□ 1.03
CHRNA1P02708 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.46■■□□□ 1.03
CHRNA1P02708 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.46■■□□□ 1.03
CHRNA1P02708 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CHRNA1P02708 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.46■■□□□ 1.03
CHRNA1P02708 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHRNA1P02708 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHRNA1P02708 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHRNA1P02708 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHRNA1P02708 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
CHRNA1P02708 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHRNA1P02708 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CHRNA1P02708 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHRNA1P02708 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHRNA1P02708 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.45■■□□□ 1.02
CHRNA1P02708 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.45■■□□□ 1.02
CHRNA1P02708 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.45■■□□□ 1.02
CHRNA1P02708 FAM87A-204ENST00000613235 858 ntBASIC21.45■■□□□ 1.02
CHRNA1P02708 AC006011.2-201ENST00000621313 1158 ntBASIC21.45■■□□□ 1.02
CHRNA1P02708 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.45■■□□□ 1.02
CHRNA1P02708 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHRNA1P02708 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.45■■□□□ 1.02
CHRNA1P02708 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CHRNA1P02708 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHRNA1P02708 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHRNA1P02708 AC004951.3-201ENST00000418645 1148 ntBASIC21.44■■□□□ 1.02
CHRNA1P02708 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
CHRNA1P02708 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CHRNA1P02708 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.44■■□□□ 1.02
CHRNA1P02708 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CHRNA1P02708 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHRNA1P02708 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHRNA1P02708 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHRNA1P02708 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHRNA1P02708 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CHRNA1P02708 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CHRNA1P02708 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHRNA1P02708 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CHRNA1P02708 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHRNA1P02708 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHRNA1P02708 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CHRNA1P02708 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CHRNA1P02708 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.43■■□□□ 1.02
CHRNA1P02708 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.43■■□□□ 1.02
CHRNA1P02708 LIN28AP1-201ENST00000429574 405 ntBASIC21.43■■□□□ 1.02
CHRNA1P02708 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 NTF6B-201ENST00000591913 560 ntBASIC21.43■■□□□ 1.02
CHRNA1P02708 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CHRNA1P02708 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CHRNA1P02708 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.43■■□□□ 1.02
CHRNA1P02708 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms