Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMNAP02545 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.5■□□□□ 0.87
LMNAP02545 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.49■□□□□ 0.87
LMNAP02545 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LMNAP02545 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LMNAP02545 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LMNAP02545 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LMNAP02545 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.49■□□□□ 0.87
LMNAP02545 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
LMNAP02545 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LMNAP02545 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LMNAP02545 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.49■□□□□ 0.87
LMNAP02545 AL137013.1-201ENST00000432946 1228 ntBASIC20.49■□□□□ 0.87
LMNAP02545 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
LMNAP02545 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.49■□□□□ 0.87
LMNAP02545 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.49■□□□□ 0.87
LMNAP02545 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.49■□□□□ 0.87
LMNAP02545 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.49■□□□□ 0.87
LMNAP02545 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.49■□□□□ 0.87
LMNAP02545 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LMNAP02545 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LMNAP02545 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.49■□□□□ 0.87
LMNAP02545 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LMNAP02545 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LMNAP02545 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LMNAP02545 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LMNAP02545 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
LMNAP02545 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LMNAP02545 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.48■□□□□ 0.87
LMNAP02545 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.48■□□□□ 0.87
LMNAP02545 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LMNAP02545 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.48■□□□□ 0.87
LMNAP02545 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LMNAP02545 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LMNAP02545 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.48■□□□□ 0.87
LMNAP02545 AC105020.6-201ENST00000621523 1217 ntBASIC20.48■□□□□ 0.87
LMNAP02545 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LMNAP02545 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LMNAP02545 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LMNAP02545 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LMNAP02545 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LMNAP02545 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LMNAP02545 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.48■□□□□ 0.87
LMNAP02545 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.47■□□□□ 0.87
LMNAP02545 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LMNAP02545 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LMNAP02545 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
LMNAP02545 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LMNAP02545 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LMNAP02545 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
LMNAP02545 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.47■□□□□ 0.87
LMNAP02545 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.47■□□□□ 0.87
LMNAP02545 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LMNAP02545 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LMNAP02545 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.47■□□□□ 0.87
LMNAP02545 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LMNAP02545 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.47■□□□□ 0.87
LMNAP02545 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
LMNAP02545 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.47■□□□□ 0.87
LMNAP02545 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LMNAP02545 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.47■□□□□ 0.87
LMNAP02545 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LMNAP02545 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LMNAP02545 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LMNAP02545 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.47■□□□□ 0.87
LMNAP02545 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LMNAP02545 LINC01568-207ENST00000641790 1380 ntBASIC20.46■□□□□ 0.87
LMNAP02545 BX323043.1-201ENST00000641006 1765 ntBASIC20.46■□□□□ 0.87
LMNAP02545 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LMNAP02545 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LMNAP02545 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LMNAP02545 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LMNAP02545 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LMNAP02545 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.46■□□□□ 0.87
LMNAP02545 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LMNAP02545 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.46■□□□□ 0.87
LMNAP02545 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.46■□□□□ 0.87
LMNAP02545 DUX4L26-201ENST00000489078 1255 ntBASIC20.46■□□□□ 0.87
LMNAP02545 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
LMNAP02545 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LMNAP02545 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.46■□□□□ 0.87
LMNAP02545 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.46■□□□□ 0.87
LMNAP02545 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.46■□□□□ 0.87
LMNAP02545 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LMNAP02545 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LMNAP02545 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LMNAP02545 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LMNAP02545 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LMNAP02545 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
LMNAP02545 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LMNAP02545 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LMNAP02545 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LMNAP02545 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LMNAP02545 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LMNAP02545 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.45■□□□□ 0.86
LMNAP02545 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.45■□□□□ 0.86
LMNAP02545 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.45■□□□□ 0.86
LMNAP02545 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LMNAP02545 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LMNAP02545 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms