Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFBP01127 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFBP01127 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFBP01127 AC004870.1-201ENST00000315132 882 ntBASIC19.88■□□□□ 0.77
PDGFBP01127 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFBP01127 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.88■□□□□ 0.77
PDGFBP01127 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFBP01127 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.88■□□□□ 0.77
PDGFBP01127 KRT17P6-201ENST00000453795 1220 ntBASIC19.88■□□□□ 0.77
PDGFBP01127 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.88■□□□□ 0.77
PDGFBP01127 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFBP01127 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFBP01127 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.88■□□□□ 0.77
PDGFBP01127 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDGFBP01127 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.87■□□□□ 0.77
PDGFBP01127 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.87■□□□□ 0.77
PDGFBP01127 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
PDGFBP01127 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDGFBP01127 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDGFBP01127 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.87■□□□□ 0.77
PDGFBP01127 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.87■□□□□ 0.77
PDGFBP01127 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.87■□□□□ 0.77
PDGFBP01127 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.87■□□□□ 0.77
PDGFBP01127 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.87■□□□□ 0.77
PDGFBP01127 CKBP1-201ENST00000565489 1086 ntBASIC19.87■□□□□ 0.77
PDGFBP01127 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.87■□□□□ 0.77
PDGFBP01127 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
PDGFBP01127 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDGFBP01127 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDGFBP01127 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFBP01127 LINC01311-201ENST00000565162 1445 ntBASIC19.86■□□□□ 0.77
PDGFBP01127 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFBP01127 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFBP01127 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.86■□□□□ 0.77
PDGFBP01127 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFBP01127 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.86■□□□□ 0.77
PDGFBP01127 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PDGFBP01127 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFBP01127 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFBP01127 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.86■□□□□ 0.77
PDGFBP01127 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.86■□□□□ 0.77
PDGFBP01127 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.86■□□□□ 0.77
PDGFBP01127 AC111152.3-201ENST00000569699 673 ntBASIC19.86■□□□□ 0.77
PDGFBP01127 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDGFBP01127 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PDGFBP01127 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PDGFBP01127 AC018553.1-201ENST00000616682 1458 ntBASIC19.86■□□□□ 0.77
PDGFBP01127 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDGFBP01127 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDGFBP01127 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDGFBP01127 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDGFBP01127 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDGFBP01127 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDGFBP01127 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDGFBP01127 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
PDGFBP01127 AC009078.2-202ENST00000463353 338 ntBASIC19.85■□□□□ 0.77
PDGFBP01127 Z85996.1-201ENST00000494644 937 ntBASIC19.85■□□□□ 0.77
PDGFBP01127 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.85■□□□□ 0.77
PDGFBP01127 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.85■□□□□ 0.77
PDGFBP01127 AP003041.3-201ENST00000527151 707 ntBASIC19.85■□□□□ 0.77
PDGFBP01127 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
PDGFBP01127 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.85■□□□□ 0.77
PDGFBP01127 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.85■□□□□ 0.77
PDGFBP01127 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.85■□□□□ 0.77
PDGFBP01127 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDGFBP01127 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDGFBP01127 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PDGFBP01127 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFBP01127 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFBP01127 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFBP01127 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
PDGFBP01127 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFBP01127 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.84■□□□□ 0.77
PDGFBP01127 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
PDGFBP01127 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFBP01127 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.84■□□□□ 0.77
PDGFBP01127 SPDYE13P-201ENST00000445314 798 ntBASIC19.84■□□□□ 0.77
PDGFBP01127 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.84■□□□□ 0.77
PDGFBP01127 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.84■□□□□ 0.77
PDGFBP01127 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFBP01127 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFBP01127 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.84■□□□□ 0.77
PDGFBP01127 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFBP01127 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFBP01127 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PDGFBP01127 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.84■□□□□ 0.77
PDGFBP01127 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.84■□□□□ 0.77
PDGFBP01127 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFBP01127 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDGFBP01127 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PDGFBP01127 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.84■□□□□ 0.77
PDGFBP01127 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.83■□□□□ 0.77
PDGFBP01127 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFBP01127 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFBP01127 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PDGFBP01127 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFBP01127 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFBP01127 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFBP01127 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFBP01127 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms