Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 CLDN5-201ENST00000403084 2357 ntBASIC21.97■■□□□ 1.11
PGK1P00558 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.97■■□□□ 1.11
PGK1P00558 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.96■■□□□ 1.11
PGK1P00558 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PGK1P00558 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PGK1P00558 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.96■■□□□ 1.11
PGK1P00558 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PGK1P00558 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PGK1P00558 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.96■■□□□ 1.11
PGK1P00558 YBX1P2-201ENST00000489612 999 ntBASIC21.96■■□□□ 1.11
PGK1P00558 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.96■■□□□ 1.11
PGK1P00558 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PGK1P00558 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.96■■□□□ 1.11
PGK1P00558 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PGK1P00558 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PGK1P00558 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PGK1P00558 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PGK1P00558 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.95■■□□□ 1.1
PGK1P00558 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PGK1P00558 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PGK1P00558 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PGK1P00558 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PGK1P00558 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PGK1P00558 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.95■■□□□ 1.1
PGK1P00558 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PGK1P00558 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PGK1P00558 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.95■■□□□ 1.1
PGK1P00558 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PGK1P00558 FAM207BP-201ENST00000447172 505 ntBASIC21.95■■□□□ 1.1
PGK1P00558 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PGK1P00558 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PGK1P00558 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.95■■□□□ 1.1
PGK1P00558 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PGK1P00558 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.95■■□□□ 1.1
PGK1P00558 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
PGK1P00558 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.95■■□□□ 1.1
PGK1P00558 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PGK1P00558 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PGK1P00558 PHGDH-210ENST00000641115 1638 ntBASIC21.95■■□□□ 1.1
PGK1P00558 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PGK1P00558 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
PGK1P00558 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.94■■□□□ 1.1
PGK1P00558 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.94■■□□□ 1.1
PGK1P00558 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PGK1P00558 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PGK1P00558 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PGK1P00558 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.94■■□□□ 1.1
PGK1P00558 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PGK1P00558 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PGK1P00558 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
PGK1P00558 CCR12P-201ENST00000446203 998 ntBASIC21.94■■□□□ 1.1
PGK1P00558 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.94■■□□□ 1.1
PGK1P00558 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.94■■□□□ 1.1
PGK1P00558 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.94■■□□□ 1.1
PGK1P00558 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.94■■□□□ 1.1
PGK1P00558 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.94■■□□□ 1.1
PGK1P00558 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.94■■□□□ 1.1
PGK1P00558 AC096733.2-201ENST00000609937 1394 ntBASIC21.94■■□□□ 1.1
PGK1P00558 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PGK1P00558 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PGK1P00558 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
PGK1P00558 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PGK1P00558 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PGK1P00558 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PGK1P00558 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PGK1P00558 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PGK1P00558 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.93■■□□□ 1.1
PGK1P00558 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.93■■□□□ 1.1
PGK1P00558 TSPY5P-201ENST00000426936 936 ntBASIC21.93■■□□□ 1.1
PGK1P00558 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PGK1P00558 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.93■■□□□ 1.1
PGK1P00558 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PGK1P00558 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PGK1P00558 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.93■■□□□ 1.1
PGK1P00558 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.93■■□□□ 1.1
PGK1P00558 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PGK1P00558 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.93■■□□□ 1.1
PGK1P00558 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PGK1P00558 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.93■■□□□ 1.1
PGK1P00558 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.93■■□□□ 1.1
PGK1P00558 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.93■■□□□ 1.1
PGK1P00558 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PGK1P00558 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.92■■□□□ 1.1
PGK1P00558 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.92■■□□□ 1.1
PGK1P00558 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PGK1P00558 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PGK1P00558 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.92■■□□□ 1.1
PGK1P00558 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PGK1P00558 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.92■■□□□ 1.1
PGK1P00558 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PGK1P00558 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PGK1P00558 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.92■■□□□ 1.1
PGK1P00558 AC007663.1-201ENST00000438948 1240 ntBASIC21.92■■□□□ 1.1
PGK1P00558 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PGK1P00558 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.92■■□□□ 1.1
PGK1P00558 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
PGK1P00558 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.92■■□□□ 1.1
PGK1P00558 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PGK1P00558 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PGK1P00558 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms