Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN1O95832 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.57■□□□□ 0.4
CLDN1O95832 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN1O95832 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CLDN1O95832 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CLDN1O95832 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CLDN1O95832 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN1O95832 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN1O95832 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN1O95832 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN1O95832 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN1O95832 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN1O95832 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
CLDN1O95832 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.57■□□□□ 0.4
CLDN1O95832 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN1O95832 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN1O95832 AP000550.4-202ENST00000639755 178 ntBASIC17.57■□□□□ 0.4
CLDN1O95832 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN1O95832 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CLDN1O95832 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN1O95832 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN1O95832 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN1O95832 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CLDN1O95832 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN1O95832 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN1O95832 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN1O95832 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN1O95832 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN1O95832 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN1O95832 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN1O95832 TSPY14P-201ENST00000303979 915 ntBASIC17.56■□□□□ 0.4
CLDN1O95832 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN1O95832 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN1O95832 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN1O95832 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN1O95832 FAM8A6P-201ENST00000407496 1135 ntBASIC17.56■□□□□ 0.4
CLDN1O95832 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.56■□□□□ 0.4
CLDN1O95832 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN1O95832 AC091390.4-202ENST00000476426 537 ntBASIC17.56■□□□□ 0.4
CLDN1O95832 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
CLDN1O95832 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.56■□□□□ 0.4
CLDN1O95832 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN1O95832 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN1O95832 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN1O95832 Z98882.1-201ENST00000622160 2253 ntBASIC17.56■□□□□ 0.4
CLDN1O95832 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN1O95832 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN1O95832 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN1O95832 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN1O95832 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
CLDN1O95832 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN1O95832 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN1O95832 AC005229.4-201ENST00000610085 2198 ntBASIC17.55■□□□□ 0.4
CLDN1O95832 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN1O95832 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN1O95832 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN1O95832 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CLDN1O95832 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN1O95832 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
CLDN1O95832 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CLDN1O95832 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN1O95832 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN1O95832 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN1O95832 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CLDN1O95832 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN1O95832 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.55■□□□□ 0.4
CLDN1O95832 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN1O95832 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN1O95832 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN1O95832 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN1O95832 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN1O95832 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN1O95832 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN1O95832 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 INGX-201ENST00000359239 846 ntBASIC17.54■□□□□ 0.4
CLDN1O95832 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.54■□□□□ 0.4
CLDN1O95832 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN1O95832 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLDN1O95832 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN1O95832 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN1O95832 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN1O95832 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN1O95832 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN1O95832 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.54■□□□□ 0.4
CLDN1O95832 FAM87A-204ENST00000613235 858 ntBASIC17.54■□□□□ 0.4
CLDN1O95832 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN1O95832 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN1O95832 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN1O95832 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms