Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
LTN1O94822 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LTN1O94822 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LTN1O94822 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LTN1O94822 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC26.23■■□□□ 1.79
LTN1O94822 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC26.23■■□□□ 1.79
LTN1O94822 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC26.23■■□□□ 1.79
LTN1O94822 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC26.23■■□□□ 1.79
LTN1O94822 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
LTN1O94822 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LTN1O94822 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LTN1O94822 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LTN1O94822 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
LTN1O94822 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LTN1O94822 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LTN1O94822 FEM1AP1-201ENST00000431297 1995 ntBASIC26.23■■□□□ 1.79
LTN1O94822 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LTN1O94822 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LTN1O94822 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC26.23■■□□□ 1.79
LTN1O94822 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
LTN1O94822 GXYLT1P6-201ENST00000456472 1187 ntBASIC26.23■■□□□ 1.79
LTN1O94822 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC26.23■■□□□ 1.79
LTN1O94822 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC26.23■■□□□ 1.79
LTN1O94822 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC26.23■■□□□ 1.79
LTN1O94822 AC087388.1-201ENST00000571370 1112 ntBASIC26.23■■□□□ 1.79
LTN1O94822 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LTN1O94822 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LTN1O94822 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LTN1O94822 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
LTN1O94822 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
LTN1O94822 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LTN1O94822 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
LTN1O94822 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC26.22■■□□□ 1.79
LTN1O94822 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC26.22■■□□□ 1.79
LTN1O94822 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
LTN1O94822 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC26.22■■□□□ 1.79
LTN1O94822 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LTN1O94822 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LTN1O94822 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
LTN1O94822 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC26.21■■□□□ 1.79
LTN1O94822 DERL1-203ENST00000419562 918 ntTSL 2 BASIC26.21■■□□□ 1.79
LTN1O94822 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC26.21■■□□□ 1.79
LTN1O94822 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC26.21■■□□□ 1.79
LTN1O94822 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
LTN1O94822 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LTN1O94822 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
LTN1O94822 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
LTN1O94822 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
LTN1O94822 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
LTN1O94822 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC26.2■■□□□ 1.79
LTN1O94822 AL359075.1-203ENST00000462729 1002 ntBASIC26.2■■□□□ 1.79
LTN1O94822 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC26.2■■□□□ 1.79
LTN1O94822 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC26.2■■□□□ 1.79
LTN1O94822 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC26.2■■□□□ 1.79
LTN1O94822 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC26.2■■□□□ 1.78
LTN1O94822 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LTN1O94822 ME2-216ENST00000639850 2331 ntTSL 5 BASIC26.2■■□□□ 1.78
LTN1O94822 FAM8A6P-201ENST00000407496 1135 ntBASIC26.2■■□□□ 1.78
LTN1O94822 METTL23-204ENST00000586752 904 ntTSL 2 BASIC26.2■■□□□ 1.78
LTN1O94822 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC26.2■■□□□ 1.78
LTN1O94822 AC083849.1-201ENST00000615227 514 ntBASIC26.2■■□□□ 1.78
LTN1O94822 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
LTN1O94822 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
LTN1O94822 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC26.2■■□□□ 1.78
LTN1O94822 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LTN1O94822 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
LTN1O94822 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC26.19■■□□□ 1.78
LTN1O94822 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
LTN1O94822 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC26.19■■□□□ 1.78
LTN1O94822 GUK1-204ENST00000366721 689 ntTSL 3 BASIC26.19■■□□□ 1.78
LTN1O94822 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
LTN1O94822 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC26.19■■□□□ 1.78
LTN1O94822 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC26.19■■□□□ 1.78
LTN1O94822 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
LTN1O94822 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
LTN1O94822 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
LTN1O94822 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
LTN1O94822 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC26.18■■□□□ 1.78
LTN1O94822 CCR12P-201ENST00000446203 998 ntBASIC26.18■■□□□ 1.78
LTN1O94822 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
LTN1O94822 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
LTN1O94822 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.18■■□□□ 1.78
LTN1O94822 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
LTN1O94822 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
LTN1O94822 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
LTN1O94822 AC008040.2-201ENST00000461049 708 ntBASIC26.18■■□□□ 1.78
LTN1O94822 AL138966.2-201ENST00000621997 464 ntBASIC26.18■■□□□ 1.78
LTN1O94822 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC26.17■■□□□ 1.78
LTN1O94822 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
LTN1O94822 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC26.17■■□□□ 1.78
LTN1O94822 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
LTN1O94822 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LTN1O94822 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC26.17■■□□□ 1.78
LTN1O94822 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LTN1O94822 AC010653.2-201ENST00000623505 997 ntBASIC26.17■■□□□ 1.78
LTN1O94822 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LTN1O94822 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
LTN1O94822 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LTN1O94822 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
LTN1O94822 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms