Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP1O94782 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
USP1O94782 GPX1P1-201ENST00000388829 606 ntBASIC19.89■□□□□ 0.77
USP1O94782 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP1O94782 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP1O94782 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP1O94782 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.89■□□□□ 0.77
USP1O94782 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.89■□□□□ 0.77
USP1O94782 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP1O94782 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.89■□□□□ 0.77
USP1O94782 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.89■□□□□ 0.77
USP1O94782 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
USP1O94782 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP1O94782 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
USP1O94782 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.89■□□□□ 0.77
USP1O94782 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
USP1O94782 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP1O94782 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP1O94782 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP1O94782 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP1O94782 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP1O94782 CROCCP5-201ENST00000436658 830 ntBASIC19.88■□□□□ 0.77
USP1O94782 AC105036.2-201ENST00000569468 176 ntBASIC19.88■□□□□ 0.77
USP1O94782 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
USP1O94782 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP1O94782 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.88■□□□□ 0.77
USP1O94782 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP1O94782 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.88■□□□□ 0.77
USP1O94782 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP1O94782 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
USP1O94782 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.87■□□□□ 0.77
USP1O94782 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.87■□□□□ 0.77
USP1O94782 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP1O94782 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.87■□□□□ 0.77
USP1O94782 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
USP1O94782 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP1O94782 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP1O94782 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.87■□□□□ 0.77
USP1O94782 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP1O94782 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.87■□□□□ 0.77
USP1O94782 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.87■□□□□ 0.77
USP1O94782 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.87■□□□□ 0.77
USP1O94782 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.87■□□□□ 0.77
USP1O94782 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.87■□□□□ 0.77
USP1O94782 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP1O94782 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP1O94782 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP1O94782 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP1O94782 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP1O94782 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
USP1O94782 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.87■□□□□ 0.77
USP1O94782 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP1O94782 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP1O94782 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP1O94782 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP1O94782 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
USP1O94782 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP1O94782 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP1O94782 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
USP1O94782 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP1O94782 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
USP1O94782 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP1O94782 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.86■□□□□ 0.77
USP1O94782 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.86■□□□□ 0.77
USP1O94782 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.86■□□□□ 0.77
USP1O94782 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.86■□□□□ 0.77
USP1O94782 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
USP1O94782 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.86■□□□□ 0.77
USP1O94782 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP1O94782 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP1O94782 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP1O94782 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP1O94782 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP1O94782 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.86■□□□□ 0.77
USP1O94782 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP1O94782 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP1O94782 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.86■□□□□ 0.77
USP1O94782 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
USP1O94782 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP1O94782 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP1O94782 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP1O94782 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP1O94782 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.86■□□□□ 0.77
USP1O94782 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP1O94782 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP1O94782 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP1O94782 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP1O94782 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
USP1O94782 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP1O94782 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
USP1O94782 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP1O94782 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP1O94782 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
USP1O94782 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP1O94782 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
USP1O94782 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.85■□□□□ 0.77
USP1O94782 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.85■□□□□ 0.77
USP1O94782 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
USP1O94782 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP1O94782 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms