Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF253O75346 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ZNF253O75346 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF253O75346 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF253O75346 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF253O75346 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF253O75346 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF253O75346 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF253O75346 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF253O75346 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF253O75346 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF253O75346 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF253O75346 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF253O75346 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
ZNF253O75346 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF253O75346 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ZNF253O75346 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF253O75346 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF253O75346 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF253O75346 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF253O75346 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF253O75346 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF253O75346 AC005837.3-201ENST00000612163 286 ntBASIC15.28■□□□□ 0.04
ZNF253O75346 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF253O75346 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF253O75346 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF253O75346 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
ZNF253O75346 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF253O75346 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF253O75346 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ZNF253O75346 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF253O75346 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF253O75346 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ZNF253O75346 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF253O75346 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
ZNF253O75346 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.27■□□□□ 0.04
ZNF253O75346 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ZNF253O75346 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 AC007613.1-201ENST00000572811 2597 ntBASIC15.27■□□□□ 0.04
ZNF253O75346 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 KRT19P1-201ENST00000405746 1186 ntBASIC15.27■□□□□ 0.04
ZNF253O75346 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.27■□□□□ 0.04
ZNF253O75346 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF253O75346 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.27■□□□□ 0.04
ZNF253O75346 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.27■□□□□ 0.04
ZNF253O75346 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF253O75346 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
ZNF253O75346 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF253O75346 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.27■□□□□ 0.03
ZNF253O75346 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF253O75346 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
ZNF253O75346 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF253O75346 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF253O75346 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
ZNF253O75346 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF253O75346 AC087633.2-202ENST00000565166 1439 ntBASIC15.26■□□□□ 0.03
ZNF253O75346 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF253O75346 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
ZNF253O75346 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF253O75346 AC093503.3-201ENST00000624917 2352 ntBASIC15.26■□□□□ 0.03
ZNF253O75346 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF253O75346 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF253O75346 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF253O75346 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF253O75346 FZD10-202ENST00000539839 3282 ntBASIC15.26■□□□□ 0.03
ZNF253O75346 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF253O75346 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF253O75346 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.26■□□□□ 0.03
ZNF253O75346 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF253O75346 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ZNF253O75346 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ZNF253O75346 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF253O75346 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF253O75346 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF253O75346 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF253O75346 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF253O75346 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF253O75346 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF253O75346 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF253O75346 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF253O75346 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ZNF253O75346 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 AC005332.8-201ENST00000622750 2735 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms