Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.22■□□□□ 0.67
GFRA3O60609 AC027796.2-201ENST00000575326 344 ntBASIC19.22■□□□□ 0.67
GFRA3O60609 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GFRA3O60609 AL691403.2-201ENST00000618460 490 ntBASIC19.22■□□□□ 0.67
GFRA3O60609 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GFRA3O60609 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GFRA3O60609 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GFRA3O60609 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GFRA3O60609 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.22■□□□□ 0.67
GFRA3O60609 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA3O60609 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA3O60609 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA3O60609 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA3O60609 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA3O60609 MIR564-202ENST00000385049 94 ntBASIC19.21■□□□□ 0.67
GFRA3O60609 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA3O60609 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GFRA3O60609 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.21■□□□□ 0.67
GFRA3O60609 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.21■□□□□ 0.67
GFRA3O60609 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.21■□□□□ 0.67
GFRA3O60609 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.21■□□□□ 0.67
GFRA3O60609 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GFRA3O60609 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.21■□□□□ 0.67
GFRA3O60609 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.21■□□□□ 0.67
GFRA3O60609 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.21■□□□□ 0.67
GFRA3O60609 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA3O60609 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.21■□□□□ 0.67
GFRA3O60609 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA3O60609 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
GFRA3O60609 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA3O60609 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA3O60609 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
GFRA3O60609 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA3O60609 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.21■□□□□ 0.67
GFRA3O60609 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.2■□□□□ 0.66
GFRA3O60609 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.2■□□□□ 0.66
GFRA3O60609 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA3O60609 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA3O60609 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA3O60609 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.2■□□□□ 0.66
GFRA3O60609 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA3O60609 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA3O60609 AC005104.2-201ENST00000427818 678 ntBASIC19.2■□□□□ 0.66
GFRA3O60609 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.2■□□□□ 0.66
GFRA3O60609 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.2■□□□□ 0.66
GFRA3O60609 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA3O60609 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA3O60609 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA3O60609 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA3O60609 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.2■□□□□ 0.66
GFRA3O60609 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA3O60609 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.2■□□□□ 0.66
GFRA3O60609 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
GFRA3O60609 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GFRA3O60609 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.19■□□□□ 0.66
GFRA3O60609 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.19■□□□□ 0.66
GFRA3O60609 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GFRA3O60609 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GFRA3O60609 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GFRA3O60609 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GFRA3O60609 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
GFRA3O60609 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.19■□□□□ 0.66
GFRA3O60609 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.19■□□□□ 0.66
GFRA3O60609 POLD2P1-201ENST00000511220 997 ntBASIC19.19■□□□□ 0.66
GFRA3O60609 AP000867.3-201ENST00000524675 377 ntBASIC19.19■□□□□ 0.66
GFRA3O60609 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.19■□□□□ 0.66
GFRA3O60609 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GFRA3O60609 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GFRA3O60609 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
GFRA3O60609 PMS2P7-201ENST00000506558 1336 ntBASIC19.19■□□□□ 0.66
GFRA3O60609 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GFRA3O60609 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GFRA3O60609 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GFRA3O60609 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
GFRA3O60609 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
GFRA3O60609 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GFRA3O60609 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GFRA3O60609 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.18■□□□□ 0.66
GFRA3O60609 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.18■□□□□ 0.66
GFRA3O60609 SLC25A1P1-201ENST00000528351 927 ntBASIC19.18■□□□□ 0.66
GFRA3O60609 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.18■□□□□ 0.66
GFRA3O60609 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.18■□□□□ 0.66
GFRA3O60609 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.18■□□□□ 0.66
GFRA3O60609 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
GFRA3O60609 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.18■□□□□ 0.66
GFRA3O60609 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GFRA3O60609 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GFRA3O60609 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GFRA3O60609 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.17■□□□□ 0.66
GFRA3O60609 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GFRA3O60609 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.17■□□□□ 0.66
GFRA3O60609 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GFRA3O60609 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GFRA3O60609 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GFRA3O60609 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GFRA3O60609 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GFRA3O60609 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GFRA3O60609 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GFRA3O60609 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.17■□□□□ 0.66
GFRA3O60609 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms