Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA12O60330 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHGA12O60330 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA12O60330 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDHGA12O60330 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA12O60330 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA12O60330 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
PCDHGA12O60330 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PCDHGA12O60330 KRT18P22-201ENST00000402024 1347 ntBASIC19.51■□□□□ 0.71
PCDHGA12O60330 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA12O60330 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PCDHGA12O60330 AL049796.1-201ENST00000565336 1766 ntBASIC19.5■□□□□ 0.71
PCDHGA12O60330 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA12O60330 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA12O60330 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHGA12O60330 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.5■□□□□ 0.71
PCDHGA12O60330 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHGA12O60330 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA12O60330 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA12O60330 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA12O60330 NAPSB-206ENST00000562112 1266 ntBASIC19.5■□□□□ 0.71
PCDHGA12O60330 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA12O60330 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHGA12O60330 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PCDHGA12O60330 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGA12O60330 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA12O60330 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA12O60330 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA12O60330 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGA12O60330 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA12O60330 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA12O60330 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA12O60330 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGA12O60330 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA12O60330 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
PCDHGA12O60330 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA12O60330 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
PCDHGA12O60330 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA12O60330 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA12O60330 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGA12O60330 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA12O60330 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA12O60330 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA12O60330 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHGA12O60330 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA12O60330 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA12O60330 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHGA12O60330 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.49■□□□□ 0.71
PCDHGA12O60330 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA12O60330 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA12O60330 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA12O60330 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PCDHGA12O60330 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHGA12O60330 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGA12O60330 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA12O60330 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGA12O60330 CR392000.1-201ENST00000624770 1228 ntBASIC19.48■□□□□ 0.71
PCDHGA12O60330 KRT16P1-201ENST00000399124 1418 ntBASIC19.48■□□□□ 0.71
PCDHGA12O60330 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA12O60330 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGA12O60330 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA12O60330 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA12O60330 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGA12O60330 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA12O60330 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA12O60330 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA12O60330 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHGA12O60330 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGA12O60330 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.47■□□□□ 0.71
PCDHGA12O60330 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHGA12O60330 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGA12O60330 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.47■□□□□ 0.71
PCDHGA12O60330 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHGA12O60330 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA12O60330 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGA12O60330 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGA12O60330 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGA12O60330 PTBP1P-201ENST00000554374 1601 ntBASIC19.47■□□□□ 0.71
PCDHGA12O60330 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGA12O60330 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA12O60330 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA12O60330 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA12O60330 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA12O60330 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA12O60330 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms