Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
SMAD9O15198 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SMAD9O15198 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SMAD9O15198 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SMAD9O15198 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.82■□□□□ 0.44
SMAD9O15198 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.82■□□□□ 0.44
SMAD9O15198 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
SMAD9O15198 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.82■□□□□ 0.44
SMAD9O15198 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.82■□□□□ 0.44
SMAD9O15198 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.82■□□□□ 0.44
SMAD9O15198 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SMAD9O15198 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.82■□□□□ 0.44
SMAD9O15198 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SMAD9O15198 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 KRT16P6-202ENST00000425692 1426 ntBASIC17.81■□□□□ 0.44
SMAD9O15198 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD9O15198 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD9O15198 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
SMAD9O15198 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.81■□□□□ 0.44
SMAD9O15198 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.81■□□□□ 0.44
SMAD9O15198 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD9O15198 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD9O15198 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD9O15198 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD9O15198 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SMAD9O15198 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD9O15198 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.81■□□□□ 0.44
SMAD9O15198 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.81■□□□□ 0.44
SMAD9O15198 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.81■□□□□ 0.44
SMAD9O15198 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.81■□□□□ 0.44
SMAD9O15198 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD9O15198 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.81■□□□□ 0.44
SMAD9O15198 AC120498.8-201ENST00000614275 531 ntBASIC17.81■□□□□ 0.44
SMAD9O15198 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD9O15198 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD9O15198 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD9O15198 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD9O15198 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD9O15198 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.81■□□□□ 0.44
SMAD9O15198 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SMAD9O15198 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD9O15198 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SMAD9O15198 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD9O15198 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD9O15198 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD9O15198 AC099778.1-201ENST00000568593 1911 ntBASIC17.8■□□□□ 0.44
SMAD9O15198 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
SMAD9O15198 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD9O15198 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.8■□□□□ 0.44
SMAD9O15198 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD9O15198 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD9O15198 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.8■□□□□ 0.44
SMAD9O15198 RPS2P52-201ENST00000469610 820 ntBASIC17.8■□□□□ 0.44
SMAD9O15198 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.8■□□□□ 0.44
SMAD9O15198 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.8■□□□□ 0.44
SMAD9O15198 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.8■□□□□ 0.44
SMAD9O15198 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD9O15198 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD9O15198 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD9O15198 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SMAD9O15198 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SMAD9O15198 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD9O15198 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD9O15198 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.8■□□□□ 0.44
SMAD9O15198 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.8■□□□□ 0.44
SMAD9O15198 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD9O15198 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD9O15198 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SMAD9O15198 AC124283.5-201ENST00000624661 1809 ntBASIC17.79■□□□□ 0.44
SMAD9O15198 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SMAD9O15198 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD9O15198 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
SMAD9O15198 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SMAD9O15198 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD9O15198 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD9O15198 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SMAD9O15198 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD9O15198 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD9O15198 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.79■□□□□ 0.44
SMAD9O15198 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 279.8 ms