Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC28A1O00337 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SLC28A1O00337 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC28A1O00337 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC28A1O00337 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC28A1O00337 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC28A1O00337 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SLC28A1O00337 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC28A1O00337 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.93■□□□□ 0.62
SLC28A1O00337 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC28A1O00337 AC098818.2-201ENST00000564925 2320 ntBASIC18.92■□□□□ 0.62
SLC28A1O00337 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A1O00337 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLC28A1O00337 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC28A1O00337 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC28A1O00337 AC018553.1-201ENST00000616682 1458 ntBASIC18.92■□□□□ 0.62
SLC28A1O00337 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A1O00337 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A1O00337 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A1O00337 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A1O00337 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A1O00337 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SLC28A1O00337 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
SLC28A1O00337 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A1O00337 AF201337.1-201ENST00000520239 748 ntBASIC18.92■□□□□ 0.62
SLC28A1O00337 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A1O00337 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A1O00337 AP000974.1-201ENST00000623909 2387 ntBASIC18.92■□□□□ 0.62
SLC28A1O00337 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC28A1O00337 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLC28A1O00337 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
SLC28A1O00337 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC28A1O00337 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A1O00337 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A1O00337 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A1O00337 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
SLC28A1O00337 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SLC28A1O00337 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 AL032819.2-201ENST00000624543 2162 ntBASIC18.91■□□□□ 0.62
SLC28A1O00337 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 AC116351.2-201ENST00000606540 1585 ntBASIC18.91■□□□□ 0.62
SLC28A1O00337 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SLC28A1O00337 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC28A1O00337 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC28A1O00337 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.91■□□□□ 0.62
SLC28A1O00337 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
SLC28A1O00337 AC105036.2-201ENST00000569468 176 ntBASIC18.91■□□□□ 0.62
SLC28A1O00337 AC073111.5-205ENST00000641717 521 ntBASIC18.91■□□□□ 0.62
SLC28A1O00337 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC28A1O00337 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SLC28A1O00337 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC28A1O00337 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SLC28A1O00337 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A1O00337 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SLC28A1O00337 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A1O00337 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC28A1O00337 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC28A1O00337 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A1O00337 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC28A1O00337 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLC28A1O00337 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A1O00337 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A1O00337 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A1O00337 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC28A1O00337 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC28A1O00337 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A1O00337 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A1O00337 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.9■□□□□ 0.62
SLC28A1O00337 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A1O00337 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC28A1O00337 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A1O00337 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC28A1O00337 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SLC28A1O00337 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SLC28A1O00337 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A1O00337 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC28A1O00337 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
SLC28A1O00337 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A1O00337 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SLC28A1O00337 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A1O00337 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A1O00337 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms