Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DDX39AO00148 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX39AO00148 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX39AO00148 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.16■■□□□ 1.14
DDX39AO00148 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
DDX39AO00148 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX39AO00148 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
DDX39AO00148 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
DDX39AO00148 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX39AO00148 AL135905.2-201ENST00000584934 1404 ntBASIC22.16■■□□□ 1.14
DDX39AO00148 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.16■■□□□ 1.14
DDX39AO00148 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.16■■□□□ 1.14
DDX39AO00148 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX39AO00148 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
DDX39AO00148 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
DDX39AO00148 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX39AO00148 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DDX39AO00148 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.16■■□□□ 1.14
DDX39AO00148 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.16■■□□□ 1.14
DDX39AO00148 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DDX39AO00148 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
DDX39AO00148 AF186192.3-201ENST00000583427 947 ntBASIC22.16■■□□□ 1.14
DDX39AO00148 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.16■■□□□ 1.14
DDX39AO00148 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.16■■□□□ 1.14
DDX39AO00148 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.16■■□□□ 1.14
DDX39AO00148 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DDX39AO00148 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DDX39AO00148 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.16■■□□□ 1.14
DDX39AO00148 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX39AO00148 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
DDX39AO00148 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX39AO00148 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX39AO00148 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DDX39AO00148 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.15■■□□□ 1.14
DDX39AO00148 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.15■■□□□ 1.14
DDX39AO00148 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX39AO00148 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.15■■□□□ 1.14
DDX39AO00148 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DDX39AO00148 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX39AO00148 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
DDX39AO00148 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX39AO00148 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.15■■□□□ 1.14
DDX39AO00148 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.15■■□□□ 1.14
DDX39AO00148 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.15■■□□□ 1.14
DDX39AO00148 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX39AO00148 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.15■■□□□ 1.14
DDX39AO00148 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.15■■□□□ 1.14
DDX39AO00148 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX39AO00148 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX39AO00148 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.15■■□□□ 1.14
DDX39AO00148 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
DDX39AO00148 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX39AO00148 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DDX39AO00148 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.15■■□□□ 1.14
DDX39AO00148 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX39AO00148 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX39AO00148 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
DDX39AO00148 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
DDX39AO00148 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
DDX39AO00148 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.14■■□□□ 1.14
DDX39AO00148 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
DDX39AO00148 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
DDX39AO00148 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
DDX39AO00148 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.14■■□□□ 1.14
DDX39AO00148 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
DDX39AO00148 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
DDX39AO00148 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.14■■□□□ 1.13
DDX39AO00148 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.14■■□□□ 1.13
DDX39AO00148 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
DDX39AO00148 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
DDX39AO00148 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
DDX39AO00148 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
DDX39AO00148 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
DDX39AO00148 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.14■■□□□ 1.13
DDX39AO00148 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.14■■□□□ 1.13
DDX39AO00148 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
DDX39AO00148 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX39AO00148 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.13■■□□□ 1.13
DDX39AO00148 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.13■■□□□ 1.13
DDX39AO00148 FAM197Y1-201ENST00000421178 764 ntBASIC22.13■■□□□ 1.13
DDX39AO00148 YBX1P10-201ENST00000444752 975 ntBASIC22.13■■□□□ 1.13
DDX39AO00148 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
DDX39AO00148 AP002982.1-201ENST00000492365 877 ntBASIC22.13■■□□□ 1.13
DDX39AO00148 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
DDX39AO00148 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.13■■□□□ 1.13
DDX39AO00148 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.13■■□□□ 1.13
DDX39AO00148 AP001412.1-201ENST00000608405 714 ntBASIC22.13■■□□□ 1.13
DDX39AO00148 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
DDX39AO00148 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.13■■□□□ 1.13
DDX39AO00148 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX39AO00148 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
DDX39AO00148 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.12■■□□□ 1.13
DDX39AO00148 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DDX39AO00148 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
DDX39AO00148 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
DDX39AO00148 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX39AO00148 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.12■■□□□ 1.13
DDX39AO00148 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX39AO00148 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX39AO00148 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms