Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 GABARAPL3-202ENST00000624044 1851 ntBASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 UNC93B2-201ENST00000285383 730 ntBASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AC211429.1-201ENST00000415277 523 ntBASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 REXO1L10P-201ENST00000615707 1290 ntBASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 TMEM179-206ENST00000616017 1645 ntBASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 FEM1AP1-201ENST00000431297 1995 ntBASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AC087499.1-201ENST00000418141 1075 ntBASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 ECEL1P3-201ENST00000427961 737 ntBASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AL512408.1-201ENST00000569378 2000 ntBASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AC026271.3-201ENST00000571884 352 ntBASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 MMP23A-201ENST00000234610 1017 ntBASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 RBM17P1-201ENST00000453646 1190 ntBASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 AC116562.2-201ENST00000507042 360 ntBASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 AC131212.4-201ENST00000623606 975 ntBASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 AC133561.5-201ENST00000635547 218 ntBASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
C1QTNF3-AMACRE9PGA6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms