Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C4orf47A7E2U8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.29■□□□□ 0.68
C4orf47A7E2U8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
C4orf47A7E2U8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C4orf47A7E2U8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
C4orf47A7E2U8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 CCR12P-201ENST00000446203 998 ntBASIC19.28■□□□□ 0.68
C4orf47A7E2U8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 AP000692.2-201ENST00000608391 879 ntBASIC19.28■□□□□ 0.68
C4orf47A7E2U8 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.28■□□□□ 0.68
C4orf47A7E2U8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 PTBP1P-201ENST00000554374 1601 ntBASIC19.28■□□□□ 0.68
C4orf47A7E2U8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
C4orf47A7E2U8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C4orf47A7E2U8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
C4orf47A7E2U8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
C4orf47A7E2U8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
C4orf47A7E2U8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
C4orf47A7E2U8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
C4orf47A7E2U8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.27■□□□□ 0.67
C4orf47A7E2U8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 CLEC4GP1-201ENST00000596555 870 ntBASIC19.26■□□□□ 0.67
C4orf47A7E2U8 AC141257.4-201ENST00000634557 245 ntBASIC19.26■□□□□ 0.67
C4orf47A7E2U8 AC136944.6-201ENST00000634818 245 ntBASIC19.26■□□□□ 0.67
C4orf47A7E2U8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 AC005229.4-201ENST00000610085 2198 ntBASIC19.26■□□□□ 0.67
C4orf47A7E2U8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
C4orf47A7E2U8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.25■□□□□ 0.67
C4orf47A7E2U8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C4orf47A7E2U8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms