Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MBD3L3A6NE82 AL137060.1-201ENST00000618151 2648 ntBASIC17.33■□□□□ 0.36
MBD3L3A6NE82 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 LINC01568-207ENST00000641790 1380 ntBASIC17.32■□□□□ 0.36
MBD3L3A6NE82 AL512408.1-201ENST00000569378 2000 ntBASIC17.32■□□□□ 0.36
MBD3L3A6NE82 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 MIR1224-201ENST00000408193 85 ntBASIC17.32■□□□□ 0.36
MBD3L3A6NE82 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 AC010947.1-201ENST00000623454 693 ntBASIC17.32■□□□□ 0.36
MBD3L3A6NE82 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L3A6NE82 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 CYP2D8P-201ENST00000433633 1490 ntBASIC17.31■□□□□ 0.36
MBD3L3A6NE82 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 GABARAPL3-202ENST00000624044 1851 ntBASIC17.31■□□□□ 0.36
MBD3L3A6NE82 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 AL162377.1-201ENST00000618844 1793 ntBASIC17.31■□□□□ 0.36
MBD3L3A6NE82 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 RCC2P6-201ENST00000526625 1557 ntBASIC17.31■□□□□ 0.36
MBD3L3A6NE82 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L3A6NE82 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 KRT18P22-201ENST00000402024 1347 ntBASIC17.3■□□□□ 0.36
MBD3L3A6NE82 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 AC005363.2-201ENST00000618631 242 ntBASIC17.3■□□□□ 0.36
MBD3L3A6NE82 AC130371.2-201ENST00000619443 611 ntBASIC17.3■□□□□ 0.36
MBD3L3A6NE82 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.3■□□□□ 0.36
MBD3L3A6NE82 FEM1AP1-201ENST00000431297 1995 ntBASIC17.29■□□□□ 0.36
MBD3L3A6NE82 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms