Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC26.8■■□□□ 1.88
SBNO1A3KN83 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SBNO1A3KN83 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC26.8■■□□□ 1.88
SBNO1A3KN83 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC26.8■■□□□ 1.88
SBNO1A3KN83 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SBNO1A3KN83 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SBNO1A3KN83 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
SBNO1A3KN83 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SBNO1A3KN83 ANKRD20A18P-201ENST00000359341 492 ntBASIC26.8■■□□□ 1.88
SBNO1A3KN83 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC26.8■■□□□ 1.88
SBNO1A3KN83 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
SBNO1A3KN83 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC26.8■■□□□ 1.88
SBNO1A3KN83 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SBNO1A3KN83 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC26.8■■□□□ 1.88
SBNO1A3KN83 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC26.8■■□□□ 1.88
SBNO1A3KN83 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC26.8■■□□□ 1.88
SBNO1A3KN83 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC26.8■■□□□ 1.88
SBNO1A3KN83 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SBNO1A3KN83 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
SBNO1A3KN83 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SBNO1A3KN83 AC005229.4-201ENST00000610085 2198 ntBASIC26.79■■□□□ 1.88
SBNO1A3KN83 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SBNO1A3KN83 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC26.79■■□□□ 1.88
SBNO1A3KN83 HOMER2P1-201ENST00000455653 964 ntBASIC26.79■■□□□ 1.88
SBNO1A3KN83 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC26.79■■□□□ 1.88
SBNO1A3KN83 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC26.79■■□□□ 1.88
SBNO1A3KN83 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC26.79■■□□□ 1.88
SBNO1A3KN83 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC26.79■■□□□ 1.88
SBNO1A3KN83 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SBNO1A3KN83 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
SBNO1A3KN83 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SBNO1A3KN83 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SBNO1A3KN83 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
SBNO1A3KN83 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.78■■□□□ 1.88
SBNO1A3KN83 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SBNO1A3KN83 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SBNO1A3KN83 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
SBNO1A3KN83 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC26.78■■□□□ 1.88
SBNO1A3KN83 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SBNO1A3KN83 GXYLT1P6-201ENST00000456472 1187 ntBASIC26.78■■□□□ 1.88
SBNO1A3KN83 Z85996.1-201ENST00000494644 937 ntBASIC26.78■■□□□ 1.88
SBNO1A3KN83 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC26.78■■□□□ 1.88
SBNO1A3KN83 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SBNO1A3KN83 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.78■■□□□ 1.88
SBNO1A3KN83 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC26.78■■□□□ 1.88
SBNO1A3KN83 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
SBNO1A3KN83 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SBNO1A3KN83 AC006128.1-201ENST00000624704 1661 ntBASIC26.77■■□□□ 1.88
SBNO1A3KN83 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SBNO1A3KN83 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SBNO1A3KN83 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC26.77■■□□□ 1.88
SBNO1A3KN83 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SBNO1A3KN83 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SBNO1A3KN83 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC26.77■■□□□ 1.88
SBNO1A3KN83 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
SBNO1A3KN83 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC26.77■■□□□ 1.88
SBNO1A3KN83 AC008622.2-201ENST00000617006 1229 ntBASIC26.77■■□□□ 1.88
SBNO1A3KN83 AC116407.4-201ENST00000623319 1061 ntBASIC26.77■■□□□ 1.88
SBNO1A3KN83 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SBNO1A3KN83 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SBNO1A3KN83 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
SBNO1A3KN83 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.88
SBNO1A3KN83 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SBNO1A3KN83 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SBNO1A3KN83 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
SBNO1A3KN83 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SBNO1A3KN83 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC26.76■■□□□ 1.87
SBNO1A3KN83 AL450487.1-201ENST00000426799 995 ntBASIC26.76■■□□□ 1.87
SBNO1A3KN83 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC26.76■■□□□ 1.87
SBNO1A3KN83 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC26.76■■□□□ 1.87
SBNO1A3KN83 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC26.76■■□□□ 1.87
SBNO1A3KN83 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC26.76■■□□□ 1.87
SBNO1A3KN83 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC26.76■■□□□ 1.87
SBNO1A3KN83 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC26.76■■□□□ 1.87
SBNO1A3KN83 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC26.76■■□□□ 1.87
SBNO1A3KN83 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC26.76■■□□□ 1.87
SBNO1A3KN83 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
SBNO1A3KN83 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SBNO1A3KN83 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
SBNO1A3KN83 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC26.76■■□□□ 1.87
SBNO1A3KN83 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC26.75■■□□□ 1.87
SBNO1A3KN83 FP700111.2-201ENST00000619190 1892 ntBASIC26.75■■□□□ 1.87
SBNO1A3KN83 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
SBNO1A3KN83 AC079834.2-201ENST00000609776 1949 ntBASIC26.75■■□□□ 1.87
SBNO1A3KN83 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SBNO1A3KN83 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SBNO1A3KN83 IPPK-202ENST00000375522 882 ntTSL 3 BASIC26.75■■□□□ 1.87
SBNO1A3KN83 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC26.75■■□□□ 1.87
SBNO1A3KN83 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SBNO1A3KN83 TSPY17P-201ENST00000450329 467 ntBASIC26.75■■□□□ 1.87
SBNO1A3KN83 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC26.75■■□□□ 1.87
SBNO1A3KN83 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC26.75■■□□□ 1.87
SBNO1A3KN83 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
SBNO1A3KN83 KRT16P6-202ENST00000425692 1426 ntBASIC26.75■■□□□ 1.87
SBNO1A3KN83 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SBNO1A3KN83 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC26.74■■□□□ 1.87
SBNO1A3KN83 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SBNO1A3KN83 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SBNO1A3KN83 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
SBNO1A3KN83 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms