Protein–RNA interactions for Protein: A0A1B0GVH6

C13orf42, Chromosome 13 open reading frame 42, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42A0A1B0GVH6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C13orf42A0A1B0GVH6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
C13orf42A0A1B0GVH6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C13orf42A0A1B0GVH6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 TPRG1LP1-201ENST00000598702 760 ntBASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 AC005332.8-201ENST00000622750 2735 ntBASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 AC061975.6-201ENST00000579045 1553 ntBASIC16.6■□□□□ 0.25
C13orf42A0A1B0GVH6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 MIR935-201ENST00000401179 91 ntBASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 AC079140.4-201ENST00000507448 529 ntBASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 MIR2861-201ENST00000636310 90 ntBASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 DPP3P2-201ENST00000416030 1696 ntBASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C13orf42A0A1B0GVH6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
C13orf42A0A1B0GVH6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
C13orf42A0A1B0GVH6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.58■□□□□ 0.25
C13orf42A0A1B0GVH6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.58■□□□□ 0.25
C13orf42A0A1B0GVH6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
C13orf42A0A1B0GVH6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
C13orf42A0A1B0GVH6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
C13orf42A0A1B0GVH6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C13orf42A0A1B0GVH6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms