Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 AC135050.7-201ENST00000624508 2218 ntBASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-1A0A0K0K1D8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 AC100791.3-201ENST00000617619 330 ntBASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
TRBV6-1A0A0K0K1D8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV6-1A0A0K0K1D8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV6-1A0A0K0K1D8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV6-1A0A0K0K1D8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV6-1A0A0K0K1D8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV6-1A0A0K0K1D8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV6-1A0A0K0K1D8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.71□□□□□ -0.06
TRBV6-1A0A0K0K1D8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
TRBV6-1A0A0K0K1D8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV6-1A0A0K0K1D8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 Z98044.1-201ENST00000632503 1764 ntBASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 AL049812.1-201ENST00000432563 2267 ntBASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 AC123595.1-201ENST00000440769 1046 ntBASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 TERF1P2-201ENST00000583350 1212 ntBASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 AC090164.3-201ENST00000610780 2143 ntBASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
TRBV6-1A0A0K0K1D8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-1A0A0K0K1D8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
TRBV6-1A0A0K0K1D8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV6-1A0A0K0K1D8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-1A0A0K0K1D8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
TRBV6-1A0A0K0K1D8 AL390961.4-201ENST00000623958 2535 ntBASIC14.69□□□□□ -0.06
TRBV6-1A0A0K0K1D8 AC026471.1-201ENST00000564629 3026 ntBASIC14.69□□□□□ -0.06
TRBV6-1A0A0K0K1D8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-1A0A0K0K1D8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV6-1A0A0K0K1D8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-1A0A0K0K1D8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-1A0A0K0K1D8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-1A0A0K0K1D8 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV6-1A0A0K0K1D8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-1A0A0K0K1D8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms