Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
PCDHB4Q9Y5E5 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.84□□□□□ -1.32
PCDHB4Q9Y5E5 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 DDX43P2-201ENST00000604753 1354 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 RAD1P1-201ENST00000231383 813 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 RNA5SP485-201ENST00000365053 119 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 RNU6-481P-201ENST00000384194 107 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 SNORD116-1-201ENST00000384335 95 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 UBE2V1P11-201ENST00000411559 285 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 GAPDHP19-201ENST00000431768 1005 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 THAP5P1-201ENST00000439089 262 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 GTF2IP14-201ENST00000441415 586 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 COX4I1P2-201ENST00000447446 547 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 HMGB1P3-201ENST00000502802 616 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 HPRT1P1-201ENST00000509498 657 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AP005639.1-201ENST00000526939 192 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 OR7E128P-201ENST00000532736 1024 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AC009094.1-201ENST00000564443 426 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AC025283.1-201ENST00000572039 734 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 MIR4301-201ENST00000577203 66 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 CCDC58P3-201ENST00000590792 430 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AC010503.3-201ENST00000594355 540 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AC080013.3-201ENST00000606839 578 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AC090425.2-201ENST00000608818 501 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AC009318.3-201ENST00000616916 503 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AC007603.3-201ENST00000636915 979 ntBASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB4Q9Y5E5 Z98755.1-201ENST00000407015 1384 ntBASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 AC119674.1-213ENST00000641177 1386 ntBASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 MIR365B-201ENST00000362317 111 ntBASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 RNU6-1331P-201ENST00000363658 106 ntBASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 SNORA64.3-201ENST00000365647 134 ntBASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 MIR551B-201ENST00000384984 96 ntBASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 AC003045.1-201ENST00000398779 713 ntBASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 SEPT7P8-201ENST00000413308 775 ntBASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDHB4Q9Y5E5 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms