Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC069240.2-201ENST00000550242 609 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC011447.2-201ENST00000592921 283 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 RPS27AP19-201ENST00000597285 458 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AL583832.1-201ENST00000603227 784 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 RNU4-89P-201ENST00000607443 133 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC004223.4-201ENST00000612426 332 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 CCAT2-201ENST00000630920 1752 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
SSBP3Q9BWW4 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SSBP3Q9BWW4 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SSBP3Q9BWW4 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC016251.2-201ENST00000623393 3089 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC007382.1-201ENST00000624376 2618 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 RNU6-252P-201ENST00000363232 107 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 RNU6-413P-201ENST00000384115 107 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 MIR99A-201ENST00000384906 81 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 SNORA26.8-201ENST00000391306 124 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 MTCO1P56-201ENST00000401674 224 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 SUMO2P13-201ENST00000403109 272 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC092638.1-201ENST00000411966 1275 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 CDK8P2-201ENST00000415020 547 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 RPL17P17-201ENST00000419491 557 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC007365.2-201ENST00000428806 458 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC091862.1-201ENST00000438016 1100 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 RPL5P32-201ENST00000454085 879 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 RPL34P34-201ENST00000465389 354 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 RN7SL267P-201ENST00000485107 261 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 PRDX4P1-201ENST00000507189 574 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 MTATP6P22-201ENST00000507369 598 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 CBX3P3-201ENST00000508108 532 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC079140.3-201ENST00000511111 550 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 BCAS2P1-201ENST00000528022 632 ntBASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.83□□□□□ -1.48
SSBP3Q9BWW4 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms