Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKP4Q99569 AC130304.1-201ENST00000622942 2385 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKP4Q99569 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PKP4Q99569 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKP4Q99569 SELENOWP1-201ENST00000322792 252 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 SNORD1C-201ENST00000363315 78 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKP4Q99569 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PKP4Q99569 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKP4Q99569 RNU2-22P-201ENST00000411266 212 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 AL445213.1-201ENST00000412589 747 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 AL354890.1-201ENST00000413730 346 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 RPL24P2-201ENST00000421023 475 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 KIF4CP-201ENST00000422742 1279 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.78□□□□□ -1.48
PKP4Q99569 AC245884.2-201ENST00000426257 404 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.78□□□□□ -1.48
PKP4Q99569 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.78□□□□□ -1.48
PKP4Q99569 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.78□□□□□ -1.48
PKP4Q99569 AL445928.1-201ENST00000435545 222 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 AC110602.1-201ENST00000437414 318 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 RPS12P17-201ENST00000438591 377 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 AL390879.1-201ENST00000439143 386 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 BMS1P10-201ENST00000443754 1120 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKP4Q99569 CFL1P4-201ENST00000451536 498 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 AC089999.1-201ENST00000460336 374 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
PKP4Q99569 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.78□□□□□ -1.48
PKP4Q99569 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.78□□□□□ -1.48
PKP4Q99569 RNU6-467P-201ENST00000517027 110 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.78□□□□□ -1.48
PKP4Q99569 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.78□□□□□ -1.48
PKP4Q99569 AC025857.1-201ENST00000525252 377 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 AP003396.4-201ENST00000527574 265 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PKP4Q99569 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKP4Q99569 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.78□□□□□ -1.48
PKP4Q99569 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.78□□□□□ -1.48
PKP4Q99569 AC079905.1-201ENST00000549280 475 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.78□□□□□ -1.48
PKP4Q99569 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.78□□□□□ -1.48
PKP4Q99569 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.78□□□□□ -1.48
PKP4Q99569 AL121839.1-201ENST00000556233 1185 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 AC107958.1-201ENST00000556576 290 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.78□□□□□ -1.48
PKP4Q99569 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
PKP4Q99569 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.78□□□□□ -1.48
PKP4Q99569 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.78□□□□□ -1.48
PKP4Q99569 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.78□□□□□ -1.48
PKP4Q99569 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.78□□□□□ -1.48
PKP4Q99569 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.78□□□□□ -1.48
PKP4Q99569 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.78□□□□□ -1.48
PKP4Q99569 SNX18P12-201ENST00000624821 759 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.78□□□□□ -1.48
PKP4Q99569 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.78□□□□□ -1.48
PKP4Q99569 AC073869.7-201ENST00000640874 297 ntBASIC5.78□□□□□ -1.48
PKP4Q99569 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKP4Q99569 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKP4Q99569 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PKP4Q99569 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PKP4Q99569 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PKP4Q99569 AF287957.1-201ENST00000607368 1595 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PKP4Q99569 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PKP4Q99569 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
PKP4Q99569 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
PKP4Q99569 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.77□□□□□ -1.49
PKP4Q99569 OR5T3-201ENST00000303059 1023 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 GNG5P2-201ENST00000372054 207 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.77□□□□□ -1.49
PKP4Q99569 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PKP4Q99569 OOSP1-201ENST00000398992 1270 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 RPS26P38-201ENST00000414476 348 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.77□□□□□ -1.49
PKP4Q99569 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.77□□□□□ -1.49
PKP4Q99569 RPS4XP5-201ENST00000419038 768 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 AKR1B10P1-201ENST00000425765 942 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.77□□□□□ -1.49
PKP4Q99569 RPS3AP38-201ENST00000435889 763 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 BX679664.2-201ENST00000439282 283 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 AL663074.2-201ENST00000440621 479 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 NDUFA5P8-201ENST00000449019 346 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 OR52E7P-201ENST00000452394 933 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 AC007386.1-201ENST00000455212 582 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 AL603882.1-201ENST00000463059 681 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.77□□□□□ -1.49
PKP4Q99569 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.77□□□□□ -1.49
PKP4Q99569 PFN1P6-201ENST00000476786 399 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.77□□□□□ -1.49
PKP4Q99569 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.77□□□□□ -1.49
PKP4Q99569 LSM3P4-201ENST00000502948 309 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.77□□□□□ -1.49
PKP4Q99569 TOMM22P4-201ENST00000511318 336 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.77□□□□□ -1.49
PKP4Q99569 CCNHP1-201ENST00000513311 678 ntBASIC5.77□□□□□ -1.49
PKP4Q99569 SETP12-201ENST00000514068 805 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms