Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AC009237.3-203ENST00000442128 3551 ntBASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCHD1Q96NR3 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 RNU6-517P-201ENST00000384362 110 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 OR6C64P-201ENST00000419708 825 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC096632.2-201ENST00000438139 1239 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 MTCYBP34-201ENST00000439552 670 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AL929288.2-201ENST00000446368 407 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AL390728.3-201ENST00000452704 270 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC135721.2-201ENST00000464237 300 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 PPP1R2P6-201ENST00000478565 588 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC122714.1-201ENST00000502510 459 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 UGT2A3P7-201ENST00000510485 734 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 RNU2-30P-201ENST00000516209 141 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 HIGD1AP18-201ENST00000520730 278 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 OR7E154P-201ENST00000525174 932 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 NXPE2P1-201ENST00000543705 726 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AL121766.1-201ENST00000547436 487 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC089984.3-201ENST00000552838 363 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 MIR378C-201ENST00000578683 81 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC007255.2-201ENST00000604053 631 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 MIR6070-201ENST00000613967 103 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC105227.2-201ENST00000615075 605 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AC099842.1-201ENST00000619919 596 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AL590240.3-201ENST00000621416 943 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 AL359757.1-201ENST00000623176 255 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 RPSAP68-201ENST00000625020 438 ntBASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PTCHD1Q96NR3 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 NCOA4P2-201ENST00000340589 1813 ntBASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PTCHD1Q96NR3 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms