Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-CQ95604 RNU6-1066P-201ENST00000363573 105 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 RN7SKP269-201ENST00000365545 319 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 SNORA51.12-201ENST00000384448 134 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
HLA-CQ95604 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC8.1□□□□□ -1.11
HLA-CQ95604 AL365400.1-201ENST00000431854 640 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.1□□□□□ -1.11
HLA-CQ95604 OR52B5P-201ENST00000435337 951 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC8.1□□□□□ -1.11
HLA-CQ95604 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC8.1□□□□□ -1.11
HLA-CQ95604 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC8.1□□□□□ -1.11
HLA-CQ95604 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC8.1□□□□□ -1.11
HLA-CQ95604 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC8.1□□□□□ -1.11
HLA-CQ95604 RN7SKP183-201ENST00000517169 324 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC8.1□□□□□ -1.11
HLA-CQ95604 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC8.1□□□□□ -1.11
HLA-CQ95604 OR5M4P-201ENST00000529436 925 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC8.1□□□□□ -1.11
HLA-CQ95604 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC8.1□□□□□ -1.11
HLA-CQ95604 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC8.1□□□□□ -1.11
HLA-CQ95604 MIR3668-201ENST00000582138 75 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 AC125494.2-201ENST00000602431 657 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 AL390058.1-201ENST00000603834 629 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC8.1□□□□□ -1.11
HLA-CQ95604 AC116563.2-201ENST00000624751 535 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC8.1□□□□□ -1.11
HLA-CQ95604 AC007603.3-201ENST00000636915 979 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
HLA-CQ95604 AL162171.3-201ENST00000617439 3178 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 SLC30A8-202ENST00000456015 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-CQ95604 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-CQ95604 AMPH-201ENST00000325590 3145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-CQ95604 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
HLA-CQ95604 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
HLA-CQ95604 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
HLA-CQ95604 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC8.1□□□□□ -1.11
HLA-CQ95604 AC132825.4-201ENST00000582527 3644 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-CQ95604 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC8.1□□□□□ -1.11
HLA-CQ95604 NECAP1-201ENST00000339754 2593 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-CQ95604 AC091305.2-201ENST00000624049 1576 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 ZNF37BP-203ENST00000452306 1352 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC8.09□□□□□ -1.11
HLA-CQ95604 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-CQ95604 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-CQ95604 ZNF726-201ENST00000322487 2330 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
HLA-CQ95604 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-CQ95604 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-CQ95604 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
HLA-CQ95604 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-CQ95604 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-CQ95604 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-CQ95604 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
HLA-CQ95604 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC8.09□□□□□ -1.11
HLA-CQ95604 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-CQ95604 DNAJA1P4-201ENST00000406473 1166 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 RPL23AP47-201ENST00000408017 460 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 ALDH7A1P4-201ENST00000412255 178 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 PDCL2P1-201ENST00000419302 352 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 GAPDHP51-201ENST00000426454 1000 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 AC005033.1-201ENST00000428904 813 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 AC073900.1-201ENST00000429766 776 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC8.09□□□□□ -1.11
HLA-CQ95604 FCF1P1-201ENST00000432690 571 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-CQ95604 OR13K1P-201ENST00000444577 975 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC8.09□□□□□ -1.11
HLA-CQ95604 FABP3P2-201ENST00000453169 399 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 MTCO3P20-201ENST00000454926 688 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 RPS20P20-201ENST00000460498 340 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 AC010307.1-201ENST00000467206 836 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 FTH1P4-201ENST00000480365 553 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 AC007182.2-201ENST00000489251 402 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-CQ95604 BTG4P1-201ENST00000510421 183 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 AF131216.2-201ENST00000512316 564 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC8.09□□□□□ -1.11
HLA-CQ95604 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC8.09□□□□□ -1.11
HLA-CQ95604 AC023310.2-201ENST00000553844 547 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 AC107954.1-201ENST00000565906 727 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-CQ95604 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-CQ95604 AC011840.5-201ENST00000582125 771 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 AC018638.8-201ENST00000588755 281 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 AC007687.1-201ENST00000602704 304 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 AC245407.2-201ENST00000614199 451 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-CQ95604 JAML-213ENST00000640745 951 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-CQ95604 NAMPTP1-201ENST00000440465 2514 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 AC024610.2-204ENST00000637478 2867 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-CQ95604 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC8.09□□□□□ -1.11
HLA-CQ95604 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-CQ95604 EIF4BP4-201ENST00000441847 1780 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-CQ95604 AC022150.4-201ENST00000598322 2848 ntBASIC8.09□□□□□ -1.11
HLA-CQ95604 SERPINB2-201ENST00000299502 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-CQ95604 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
HLA-CQ95604 SNX19P2-201ENST00000452841 2971 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms