Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 RGS4-207ENST00000527809 817 ntTSL 4 BASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 AL390334.1-201ENST00000556395 450 ntBASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 AC243312.1-201ENST00000570582 275 ntBASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 MTCO2P22-201ENST00000603246 681 ntBASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 HNRNPA1P67-201ENST00000604027 926 ntBASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 AC143336.1-201ENST00000614164 836 ntBASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 AC068234.2-201ENST00000619646 522 ntBASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 MIR6723-201ENST00000621981 89 ntBASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 AC015722.2-201ENST00000622210 551 ntBASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 AC012557.3-201ENST00000626439 255 ntBASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 AL022163.1-201ENST00000430261 1569 ntBASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 UGT2B26P-201ENST00000508672 1613 ntBASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 THAP12P1-201ENST00000398672 2203 ntBASIC8.25□□□□□ -1.09
SCUBE3Q8IX30 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC119674.1-202ENST00000641333 1860 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 ATP8A2P2-201ENST00000437678 1568 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 OR11H13P-201ENST00000359695 979 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 CST13P-201ENST00000376992 428 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 MIR559-201ENST00000385188 96 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 H2AFZP3-201ENST00000394213 387 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 MIR548P-201ENST00000408336 84 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 RNU2-5P-201ENST00000410533 180 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC109780.2-201ENST00000413467 845 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 JKAMPP1-201ENST00000413804 919 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC093084.1-201ENST00000424233 687 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 SDCBPP2-201ENST00000424643 885 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 FCF1P1-201ENST00000432690 571 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC239860.1-201ENST00000444680 1270 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AL929410.2-201ENST00000451170 189 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 OR7E7P-201ENST00000455678 1012 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AL590326.1-201ENST00000460857 334 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 TAF8-207ENST00000482432 556 ntTSL 2 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 DYNLL1P6-201ENST00000503440 264 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC104108.1-201ENST00000509930 412 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC243972.3-201ENST00000539655 198 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 RPS11-202ENST00000594493 575 ntTSL 3 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 MIR6761-201ENST00000617899 72 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC090527.3-201ENST00000619041 548 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC005858.4-201ENST00000623191 700 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 TTK-211ENST00000627129 240 ntTSL 5 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 AC145138.1-201ENST00000512908 2851 ntBASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SCUBE3Q8IX30 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms