Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RPSAP51-201ENST00000497462 645 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AC105384.2-201ENST00000508433 640 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 ASNSP4-201ENST00000511103 447 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 PRMT5P1-201ENST00000514351 598 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 RN7SKP238-201ENST00000516483 249 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 RN7SKP35-201ENST00000517210 151 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 TMEM97P2-201ENST00000517841 403 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 MIR4502-201ENST00000580432 81 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AP005119.1-201ENST00000580956 292 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 MIR4433B-201ENST00000581329 102 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 AC015712.7-201ENST00000615211 635 ntBASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CCDC50Q8IVM0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 AC006600.2-201ENST00000624834 2506 ntBASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 AL354854.1-201ENST00000455940 1363 ntBASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 AC104964.3-201ENST00000606115 2860 ntBASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 RN7SKP185-201ENST00000362813 326 ntBASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 U3.7-201ENST00000363668 216 ntBASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 RN7SKP171-201ENST00000364417 303 ntBASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 AC087752.1-201ENST00000391360 558 ntBASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 NPM1P38-201ENST00000403835 865 ntBASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 AL359885.1-201ENST00000415786 903 ntBASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 DEFA9P-201ENST00000433042 285 ntBASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 AC069304.1-201ENST00000491593 704 ntBASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 HIRAP1-201ENST00000605318 787 ntBASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 AL136228.1-201ENST00000622221 319 ntBASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC50Q8IVM0 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 SNORA51.9-201ENST00000384295 124 ntBASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 MIR130B-202ENST00000385018 82 ntBASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 RN7SKP86-201ENST00000410454 332 ntBASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 VN1R21P-201ENST00000426703 765 ntBASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC097463.1-201ENST00000447288 481 ntBASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 EEF1B2P3-201ENST00000447718 678 ntBASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC005077.1-201ENST00000449226 375 ntBASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC104339.1-201ENST00000465478 348 ntBASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC099521.1-201ENST00000482557 334 ntBASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC021006.1-201ENST00000489849 553 ntBASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC009879.1-201ENST00000520029 839 ntBASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms