Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AC087516.1-201ENST00000561236 2428 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTTNQ86VV8 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTTNQ86VV8 AC007842.1-201ENST00000597336 2039 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTTNQ86VV8 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTTNQ86VV8 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTTNQ86VV8 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RTTNQ86VV8 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RTTNQ86VV8 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
RTTNQ86VV8 RNA5SP132-201ENST00000364725 118 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 AL121977.1-201ENST00000401636 979 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 RNA5SP156-201ENST00000410250 110 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 RN7SKP125-201ENST00000410481 302 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 RPS26P38-201ENST00000414476 348 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 RPS15AP30-201ENST00000420976 390 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.12□□□□□ -1.59
RTTNQ86VV8 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.12□□□□□ -1.59
RTTNQ86VV8 AC104164.1-201ENST00000460282 590 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 COPS8P2-201ENST00000473228 627 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTTNQ86VV8 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.12□□□□□ -1.59
RTTNQ86VV8 GAPDHP71-201ENST00000511530 1003 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 RNA5SP438-201ENST00000516561 112 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.12□□□□□ -1.59
RTTNQ86VV8 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.12□□□□□ -1.59
RTTNQ86VV8 GSTP1P1-201ENST00000548078 319 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 AL512310.9-201ENST00000553311 948 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.12□□□□□ -1.59
RTTNQ86VV8 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.12□□□□□ -1.59
RTTNQ86VV8 AL445222.1-201ENST00000607259 628 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTTNQ86VV8 AC235565.1-201ENST00000456962 1325 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RTTNQ86VV8 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.12□□□□□ -1.59
RTTNQ86VV8 AL161901.1-201ENST00000624954 3425 ntBASIC5.12□□□□□ -1.59
RTTNQ86VV8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RTTNQ86VV8 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.11□□□□□ -1.59
RTTNQ86VV8 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 YES1P1-201ENST00000418510 1628 ntBASIC5.11□□□□□ -1.59
RTTNQ86VV8 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTTNQ86VV8 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 AC019205.1-201ENST00000421830 730 ntBASIC5.11□□□□□ -1.59
RTTNQ86VV8 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 AC093763.2-201ENST00000505334 1223 ntBASIC5.11□□□□□ -1.59
RTTNQ86VV8 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 RNA5SP400-201ENST00000517155 111 ntBASIC5.11□□□□□ -1.59
RTTNQ86VV8 HMGN2P36-201ENST00000529541 409 ntBASIC5.11□□□□□ -1.59
RTTNQ86VV8 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTTNQ86VV8 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTTNQ86VV8 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTTNQ86VV8 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTTNQ86VV8 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTTNQ86VV8 AC144833.1-201ENST00000567953 4089 ntBASIC5.11□□□□□ -1.59
RTTNQ86VV8 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTTNQ86VV8 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTTNQ86VV8 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTTNQ86VV8 SNRPEP6-201ENST00000407465 277 ntBASIC5.11□□□□□ -1.59
RTTNQ86VV8 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 AL445466.1-201ENST00000448432 357 ntBASIC5.11□□□□□ -1.59
RTTNQ86VV8 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 AF230666.2-201ENST00000602328 725 ntBASIC5.11□□□□□ -1.59
RTTNQ86VV8 RPL12P48-201ENST00000605620 304 ntBASIC5.11□□□□□ -1.59
RTTNQ86VV8 AC079414.3-201ENST00000612986 1090 ntBASIC5.11□□□□□ -1.59
RTTNQ86VV8 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 AC087269.2-201ENST00000641764 975 ntBASIC5.11□□□□□ -1.59
RTTNQ86VV8 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.11□□□□□ -1.59
RTTNQ86VV8 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTTNQ86VV8 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTTNQ86VV8 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTTNQ86VV8 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTTNQ86VV8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTTNQ86VV8 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTTNQ86VV8 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTTNQ86VV8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RTTNQ86VV8 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTTNQ86VV8 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
RTTNQ86VV8 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.1□□□□□ -1.59
RTTNQ86VV8 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTTNQ86VV8 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.1□□□□□ -1.59
RTTNQ86VV8 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTTNQ86VV8 RNA5SP211-201ENST00000365516 117 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms