Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 PPP2R2DP1-201ENST00000420526 637 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 VN1R54P-201ENST00000435210 1049 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 DHFRP1-201ENST00000579682 559 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 MIR4436B2-201ENST00000581415 91 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 MIR4436B1-201ENST00000583272 91 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 CYP4F35P-202ENST00000636121 390 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 RN7SKP6-201ENST00000364795 319 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 U3.36-201ENST00000408418 213 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 AC073850.1-201ENST00000449243 255 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 AL672138.1-201ENST00000450604 1015 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 MEMO1P4-201ENST00000453590 386 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 HIGD1AP8-201ENST00000453927 274 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 MAL2-208ENST00000523307 556 ntTSL 4 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 AC006116.3-201ENST00000592968 361 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 HIRAP1-201ENST00000605318 787 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 AC011493.1-201ENST00000596753 1632 ntBASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 RNA5SP487-201ENST00000410186 122 ntBASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 AL645937.3-201ENST00000453647 936 ntBASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 PMS2P3-207ENST00000529061 717 ntBASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 IGLCOR22-2-201ENST00000605398 313 ntBASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 WWOX-217ENST00000620008 450 ntTSL 2 BASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 AP001784.1-201ENST00000624107 428 ntBASIC8.31□□□□□ -1.08
CCDC141Q6ZP82 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 AL589993.1-201ENST00000407450 2524 ntBASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 AL590762.4-201ENST00000425885 253 ntBASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 NIPA2P1-201ENST00000426223 976 ntBASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 FAM96AP1-201ENST00000430879 482 ntBASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 RPS3AP38-201ENST00000435889 763 ntBASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 NANOGP9-201ENST00000439890 892 ntBASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 EIF4EBP2P1-201ENST00000450009 343 ntBASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 LDHC-203ENST00000535809 757 ntTSL 5 BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 LDHC-205ENST00000537486 583 ntTSL 5 BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 AC127381.1-201ENST00000555979 939 ntBASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 OR1F2P-201ENST00000570470 933 ntBASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 AC133644.2-201ENST00000608142 540 ntBASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 OR55B1P-203ENST00000641518 2602 ntBASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 LRRC37A16P-202ENST00000586022 3725 ntBASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 AC112255.1-201ENST00000624070 2493 ntBASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC8.3□□□□□ -1.08
CCDC141Q6ZP82 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC141Q6ZP82 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC141Q6ZP82 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC8.29□□□□□ -1.08
CCDC141Q6ZP82 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC141Q6ZP82 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms