Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC8.81□□□□□ -1
RC3H1Q5TC82 RNU6-506P-201ENST00000516553 94 ntBASIC8.81□□□□□ -1
RC3H1Q5TC82 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC8.81□□□□□ -1
RC3H1Q5TC82 HIGD1AP18-201ENST00000520730 278 ntBASIC8.81□□□□□ -1
RC3H1Q5TC82 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC8.81□□□□□ -1
RC3H1Q5TC82 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC8.81□□□□□ -1
RC3H1Q5TC82 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC8.81□□□□□ -1
RC3H1Q5TC82 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC8.81□□□□□ -1
RC3H1Q5TC82 AC063977.7-201ENST00000594454 337 ntBASIC8.81□□□□□ -1
RC3H1Q5TC82 OR1S1-201ENST00000624470 978 ntBASIC8.81□□□□□ -1
RC3H1Q5TC82 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC8.81□□□□□ -1
RC3H1Q5TC82 LRRC77P-213ENST00000637727 880 ntBASIC8.81□□□□□ -1
RC3H1Q5TC82 AC010325.3-201ENST00000641084 394 ntBASIC8.81□□□□□ -1
RC3H1Q5TC82 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.81□□□□□ -1
RC3H1Q5TC82 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RC3H1Q5TC82 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.81□□□□□ -1
RC3H1Q5TC82 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC8.81□□□□□ -1
RC3H1Q5TC82 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC8.81□□□□□ -1
RC3H1Q5TC82 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC8.81□□□□□ -1
RC3H1Q5TC82 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
RC3H1Q5TC82 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
RC3H1Q5TC82 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC8.81□□□□□ -1
RC3H1Q5TC82 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC8.81□□□□□ -1
RC3H1Q5TC82 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RC3H1Q5TC82 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RC3H1Q5TC82 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
RC3H1Q5TC82 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.8□□□□□ -1
RC3H1Q5TC82 AC245505.2-201ENST00000553572 3055 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
RC3H1Q5TC82 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.8□□□□□ -1
RC3H1Q5TC82 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RC3H1Q5TC82 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RC3H1Q5TC82 CBX3P1-201ENST00000325243 554 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 RNU4-21P-201ENST00000362802 126 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 AL353625.1-202ENST00000366273 571 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 VTA1P1-201ENST00000414044 866 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC8.8□□□□□ -1
RC3H1Q5TC82 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC8.8□□□□□ -1
RC3H1Q5TC82 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC8.8□□□□□ -1
RC3H1Q5TC82 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC8.8□□□□□ -1
RC3H1Q5TC82 ZNF619P1-201ENST00000446539 752 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 PRDX1P1-201ENST00000449329 596 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC8.8□□□□□ -1
RC3H1Q5TC82 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC8.8□□□□□ -1
RC3H1Q5TC82 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC8.8□□□□□ -1
RC3H1Q5TC82 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC8.8□□□□□ -1
RC3H1Q5TC82 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC8.8□□□□□ -1
RC3H1Q5TC82 AC090058.1-201ENST00000498788 435 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC8.8□□□□□ -1
RC3H1Q5TC82 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC8.8□□□□□ -1
RC3H1Q5TC82 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC8.8□□□□□ -1
RC3H1Q5TC82 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC8.8□□□□□ -1
RC3H1Q5TC82 OR4A21P-201ENST00000532759 944 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 AC103968.1-201ENST00000557841 573 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
RC3H1Q5TC82 AC083899.3-201ENST00000603413 594 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 AC010680.3-201ENST00000604215 520 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 AL590032.1-201ENST00000604920 252 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 AC096553.1-201ENST00000605169 829 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 AL391497.1-201ENST00000608671 547 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 MIR6071-201ENST00000616741 78 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC8.8□□□□□ -1
RC3H1Q5TC82 AL157786.1-207ENST00000627771 695 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.8□□□□□ -1
RC3H1Q5TC82 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RC3H1Q5TC82 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC8.8□□□□□ -1
RC3H1Q5TC82 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RC3H1Q5TC82 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RC3H1Q5TC82 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
RC3H1Q5TC82 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC8.8□□□□□ -1
RC3H1Q5TC82 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RC3H1Q5TC82 AC090771.1-201ENST00000585803 1618 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.8□□□□□ -1
RC3H1Q5TC82 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
RC3H1Q5TC82 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC8.8□□□□□ -1
RC3H1Q5TC82 NEK2P2-201ENST00000438441 1338 ntBASIC8.8□□□□□ -1
RC3H1Q5TC82 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.8□□□□□ -1
RC3H1Q5TC82 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC8.79□□□□□ -1
RC3H1Q5TC82 AC009108.3-201ENST00000602739 3515 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
RC3H1Q5TC82 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.79□□□□□ -1
RC3H1Q5TC82 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
RC3H1Q5TC82 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC8.79□□□□□ -1
RC3H1Q5TC82 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC8.79□□□□□ -1
RC3H1Q5TC82 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
RC3H1Q5TC82 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
RC3H1Q5TC82 Y_RNA.554-201ENST00000384672 102 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC8.79□□□□□ -1
RC3H1Q5TC82 MTCO1P56-201ENST00000401674 224 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC8.79□□□□□ -1
RC3H1Q5TC82 RNA5SP198-201ENST00000410376 127 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 RNU4-74P-201ENST00000411280 161 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC8.79□□□□□ -1
RC3H1Q5TC82 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC8.79□□□□□ -1
RC3H1Q5TC82 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.79□□□□□ -1
RC3H1Q5TC82 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC8.79□□□□□ -1
RC3H1Q5TC82 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC8.79□□□□□ -1
RC3H1Q5TC82 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC8.79□□□□□ -1
RC3H1Q5TC82 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC8.79□□□□□ -1
RC3H1Q5TC82 AC114755.4-201ENST00000439114 443 ntBASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms