Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 MIR130A-201ENST00000385274 89 ntBASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 SEPT7P2-202ENST00000398921 823 ntBASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 NACAP7-201ENST00000407371 609 ntBASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 RPS6P23-201ENST00000413224 722 ntBASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 AL163193.1-201ENST00000444895 788 ntBASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 MYO5BP2-201ENST00000449815 1277 ntBASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 RPS26P41-201ENST00000450370 284 ntBASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 VDAC2P4-201ENST00000452925 711 ntBASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 AC006539.1-201ENST00000481419 501 ntBASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 MIR4260-201ENST00000583107 67 ntBASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 AC007683.2-201ENST00000624681 714 ntBASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 AP000550.3-201ENST00000637734 379 ntBASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SHROOM1Q2M3G4 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AP003170.5-201ENST00000397185 335 ntBASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AC016769.2-201ENST00000414815 475 ntBASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AL590399.4-201ENST00000436561 601 ntBASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AC006335.2-201ENST00000437993 330 ntBASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 PTMAP6-201ENST00000439110 327 ntBASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 RPL7L1P3-201ENST00000455249 689 ntBASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AC100832.1-201ENST00000471945 383 ntBASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AC087672.1-201ENST00000479876 766 ntBASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 IGLV3-24-201ENST00000517477 197 ntBASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 SUMO2P19-201ENST00000518920 295 ntBASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AC005224.3-201ENST00000584683 2140 ntBASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 AC069234.4-201ENST00000621276 412 ntBASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 PABPC1P6-201ENST00000445594 1829 ntBASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHROOM1Q2M3G4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 U3.7-201ENST00000363668 216 ntBASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 HMGA1P8-201ENST00000414130 321 ntBASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 CLUHP1-201ENST00000435012 1190 ntBASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 SPRYD7P1-201ENST00000443861 570 ntBASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 RN7SL570P-201ENST00000484405 292 ntBASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 TOMM22P4-201ENST00000511318 336 ntBASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms