Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC5.46□□□□□ -1.53
CACNA1BQ00975 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
CACNA1BQ00975 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CACNA1BQ00975 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.46□□□□□ -1.53
CACNA1BQ00975 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CACNA1BQ00975 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CACNA1BQ00975 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CACNA1BQ00975 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 RN7SKP29-201ENST00000410957 272 ntBASIC5.46□□□□□ -1.54
CACNA1BQ00975 AC096537.2-201ENST00000413707 714 ntBASIC5.46□□□□□ -1.54
CACNA1BQ00975 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 MED28P3-201ENST00000444288 531 ntBASIC5.46□□□□□ -1.54
CACNA1BQ00975 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 AC018816.2-201ENST00000621460 353 ntBASIC5.46□□□□□ -1.54
CACNA1BQ00975 OR8B1P-202ENST00000641132 1178 ntBASIC5.46□□□□□ -1.54
CACNA1BQ00975 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CACNA1BQ00975 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CACNA1BQ00975 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CACNA1BQ00975 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CACNA1BQ00975 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CACNA1BQ00975 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CACNA1BQ00975 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CACNA1BQ00975 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CACNA1BQ00975 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CACNA1BQ00975 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 DUTP5-201ENST00000406790 469 ntBASIC5.46□□□□□ -1.54
CACNA1BQ00975 U3.36-201ENST00000408418 213 ntBASIC5.46□□□□□ -1.54
CACNA1BQ00975 CYCSP6-201ENST00000434498 302 ntBASIC5.46□□□□□ -1.54
CACNA1BQ00975 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 AL008723.3-201ENST00000608926 449 ntBASIC5.46□□□□□ -1.54
CACNA1BQ00975 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.46□□□□□ -1.54
CACNA1BQ00975 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.46□□□□□ -1.54
CACNA1BQ00975 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CACNA1BQ00975 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CACNA1BQ00975 AC007938.2-201ENST00000604666 2634 ntBASIC5.46□□□□□ -1.54
CACNA1BQ00975 AL034546.1-201ENST00000623740 3693 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 AL359195.2-201ENST00000623657 4412 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CACNA1BQ00975 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 CUBNP3-201ENST00000457461 1784 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CACNA1BQ00975 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CACNA1BQ00975 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CACNA1BQ00975 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CACNA1BQ00975 AC113412.1-201ENST00000425840 504 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 AC091390.3-201ENST00000426478 338 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 RPL7P32-201ENST00000457119 744 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 AC010343.2-201ENST00000510162 224 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 AC063977.5-201ENST00000601044 974 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 AC091905.4-201ENST00000623432 202 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 AC016251.2-201ENST00000623393 3089 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CACNA1BQ00975 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CACNA1BQ00975 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CACNA1BQ00975 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CACNA1BQ00975 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CACNA1BQ00975 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CACNA1BQ00975 Y_RNA.333-201ENST00000365274 102 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 AL133173.1-201ENST00000423458 397 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 AC022215.1-201ENST00000481770 362 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 RPL23AP72-201ENST00000492447 435 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.45□□□□□ -1.54
CACNA1BQ00975 AL049872.1-201ENST00000556323 322 ntBASIC5.45□□□□□ -1.54
CACNA1BQ00975 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms