Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CLTCL1P53675 HMGB1P44-201ENST00000508597 572 ntBASIC7.91□□□□□ -1.14
CLTCL1P53675 AC021106.1-201ENST00000509020 1058 ntBASIC7.91□□□□□ -1.14
CLTCL1P53675 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.91□□□□□ -1.14
CLTCL1P53675 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.91□□□□□ -1.14
CLTCL1P53675 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.91□□□□□ -1.14
CLTCL1P53675 AC087763.1-201ENST00000603391 286 ntBASIC7.91□□□□□ -1.14
CLTCL1P53675 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC7.91□□□□□ -1.14
CLTCL1P53675 AL133481.2-203ENST00000607558 139 ntBASIC7.91□□□□□ -1.14
CLTCL1P53675 U1.25-201ENST00000614085 162 ntBASIC7.91□□□□□ -1.14
CLTCL1P53675 U1.34-201ENST00000618578 162 ntBASIC7.91□□□□□ -1.14
CLTCL1P53675 U1.31-201ENST00000620022 160 ntBASIC7.91□□□□□ -1.14
CLTCL1P53675 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.91□□□□□ -1.14
CLTCL1P53675 AC005225.5-201ENST00000623547 2225 ntBASIC7.91□□□□□ -1.14
CLTCL1P53675 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.91□□□□□ -1.14
CLTCL1P53675 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.91□□□□□ -1.14
CLTCL1P53675 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.91□□□□□ -1.14
CLTCL1P53675 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLTCL1P53675 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.91□□□□□ -1.14
CLTCL1P53675 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
CLTCL1P53675 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CLTCL1P53675 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLTCL1P53675 HYDIN2-203ENST00000614586 13885 ntBASIC7.91□□□□□ -1.14
CLTCL1P53675 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CLTCL1P53675 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC7.9□□□□□ -1.14
CLTCL1P53675 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CLTCL1P53675 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CLTCL1P53675 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CLTCL1P53675 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
CLTCL1P53675 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
CLTCL1P53675 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC7.9□□□□□ -1.14
CLTCL1P53675 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
CLTCL1P53675 RN7SKP6-201ENST00000364795 319 ntBASIC7.9□□□□□ -1.14
CLTCL1P53675 RNA5SP487-201ENST00000410186 122 ntBASIC7.9□□□□□ -1.14
CLTCL1P53675 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC7.9□□□□□ -1.14
CLTCL1P53675 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC7.9□□□□□ -1.14
CLTCL1P53675 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC7.9□□□□□ -1.14
CLTCL1P53675 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC7.9□□□□□ -1.14
CLTCL1P53675 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.9□□□□□ -1.14
CLTCL1P53675 MAL2-208ENST00000523307 556 ntTSL 4 BASIC7.9□□□□□ -1.14
CLTCL1P53675 OR5AM1P-201ENST00000532136 1032 ntBASIC7.9□□□□□ -1.14
CLTCL1P53675 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC7.9□□□□□ -1.14
CLTCL1P53675 AL513327.3-201ENST00000602618 469 ntBASIC7.9□□□□□ -1.14
CLTCL1P53675 AL353729.2-201ENST00000605859 1249 ntBASIC7.9□□□□□ -1.14
CLTCL1P53675 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.9□□□□□ -1.14
CLTCL1P53675 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.9□□□□□ -1.15
CLTCL1P53675 AC011493.1-201ENST00000596753 1632 ntBASIC7.9□□□□□ -1.15
CLTCL1P53675 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.9□□□□□ -1.15
CLTCL1P53675 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CLTCL1P53675 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CLTCL1P53675 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CLTCL1P53675 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CLTCL1P53675 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CLTCL1P53675 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLTCL1P53675 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.89□□□□□ -1.15
CLTCL1P53675 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLTCL1P53675 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLTCL1P53675 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC7.89□□□□□ -1.15
CLTCL1P53675 SNORA67-201ENST00000384423 137 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 FAM96AP1-201ENST00000430879 482 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC7.89□□□□□ -1.15
CLTCL1P53675 AC004453.1-201ENST00000487895 408 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC7.89□□□□□ -1.15
CLTCL1P53675 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.89□□□□□ -1.15
CLTCL1P53675 AC024940.3-201ENST00000538551 316 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.89□□□□□ -1.15
CLTCL1P53675 OR1F2P-201ENST00000570470 933 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.89□□□□□ -1.15
CLTCL1P53675 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.89□□□□□ -1.15
CLTCL1P53675 AC093829.1-201ENST00000506662 1618 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLTCL1P53675 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLTCL1P53675 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CLTCL1P53675 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC7.89□□□□□ -1.15
CLTCL1P53675 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLTCL1P53675 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.89□□□□□ -1.15
CLTCL1P53675 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
CLTCL1P53675 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLTCL1P53675 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CLTCL1P53675 AC013268.3-201ENST00000262716 2324 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
CLTCL1P53675 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC7.89□□□□□ -1.15
CLTCL1P53675 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLTCL1P53675 AL034546.1-201ENST00000623740 3693 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 RNU1-136P-201ENST00000384181 164 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 MIR765-201ENST00000390226 114 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CLTCL1P53675 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.89□□□□□ -1.15
CLTCL1P53675 AC096921.1-201ENST00000411661 375 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC7.89□□□□□ -1.15
CLTCL1P53675 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC7.89□□□□□ -1.15
CLTCL1P53675 KRT8P51-201ENST00000438938 274 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 HIGD1AP8-201ENST00000453927 274 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CLTCL1P53675 MTND6P2-201ENST00000512226 524 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 snoU109.5-201ENST00000516231 132 ntBASIC7.89□□□□□ -1.15
CLTCL1P53675 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.89□□□□□ -1.15
CLTCL1P53675 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms