Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.89□□□□□ -1.31
NUP98P52948 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
NUP98P52948 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NUP98P52948 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.88□□□□□ -1.31
NUP98P52948 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
NUP98P52948 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NUP98P52948 TTC3P1-201ENST00000399586 6081 ntBASIC6.88□□□□□ -1.31
NUP98P52948 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NUP98P52948 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NUP98P52948 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
NUP98P52948 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
NUP98P52948 DBIP1-201ENST00000401435 260 ntBASIC6.88□□□□□ -1.31
NUP98P52948 RBMY2KP-201ENST00000418221 992 ntBASIC6.88□□□□□ -1.31
NUP98P52948 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.88□□□□□ -1.31
NUP98P52948 COX6B1P2-201ENST00000489624 230 ntBASIC6.88□□□□□ -1.31
NUP98P52948 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
NUP98P52948 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.88□□□□□ -1.31
NUP98P52948 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.88□□□□□ -1.31
NUP98P52948 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.88□□□□□ -1.31
NUP98P52948 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.88□□□□□ -1.31
NUP98P52948 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.88□□□□□ -1.31
NUP98P52948 AC018809.2-201ENST00000602436 3823 ntBASIC6.88□□□□□ -1.31
NUP98P52948 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.88□□□□□ -1.31
NUP98P52948 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
NUP98P52948 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.88□□□□□ -1.31
NUP98P52948 MRRFP1-201ENST00000435941 1675 ntBASIC6.88□□□□□ -1.31
NUP98P52948 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.88□□□□□ -1.31
NUP98P52948 AC068769.1-201ENST00000474767 2426 ntBASIC6.88□□□□□ -1.31
NUP98P52948 AC083899.1-201ENST00000454465 3819 ntBASIC6.88□□□□□ -1.31
NUP98P52948 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
NUP98P52948 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.88□□□□□ -1.31
NUP98P52948 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.88□□□□□ -1.31
NUP98P52948 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
NUP98P52948 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.88□□□□□ -1.31
NUP98P52948 AL353796.1-201ENST00000561542 3241 ntBASIC6.88□□□□□ -1.31
NUP98P52948 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
NUP98P52948 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
NUP98P52948 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NUP98P52948 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
NUP98P52948 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NUP98P52948 RN7SKP104-201ENST00000362605 328 ntBASIC6.87□□□□□ -1.31
NUP98P52948 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.87□□□□□ -1.31
NUP98P52948 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.87□□□□□ -1.31
NUP98P52948 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.87□□□□□ -1.31
NUP98P52948 IGLV2-34-201ENST00000490007 283 ntBASIC6.87□□□□□ -1.31
NUP98P52948 PMS2P3-207ENST00000529061 717 ntBASIC6.87□□□□□ -1.31
NUP98P52948 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.87□□□□□ -1.31
NUP98P52948 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.87□□□□□ -1.31
NUP98P52948 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NUP98P52948 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.87□□□□□ -1.31
NUP98P52948 AC090607.5-201ENST00000615692 224 ntBASIC6.87□□□□□ -1.31
NUP98P52948 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.87□□□□□ -1.31
NUP98P52948 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
NUP98P52948 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.87□□□□□ -1.31
NUP98P52948 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NUP98P52948 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.87□□□□□ -1.31
NUP98P52948 HSPA8P18-201ENST00000439846 1928 ntBASIC6.87□□□□□ -1.31
NUP98P52948 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NUP98P52948 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NUP98P52948 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NUP98P52948 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NUP98P52948 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
NUP98P52948 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NUP98P52948 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NUP98P52948 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NUP98P52948 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.87□□□□□ -1.31
NUP98P52948 Z80107.2-201ENST00000445127 392 ntBASIC6.87□□□□□ -1.31
NUP98P52948 DNAJB5P1-201ENST00000454004 806 ntBASIC6.87□□□□□ -1.31
NUP98P52948 AC079841.1-201ENST00000481228 950 ntBASIC6.87□□□□□ -1.31
NUP98P52948 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.87□□□□□ -1.31
NUP98P52948 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.87□□□□□ -1.31
NUP98P52948 OR11H3P-201ENST00000554547 982 ntBASIC6.87□□□□□ -1.31
NUP98P52948 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.87□□□□□ -1.31
NUP98P52948 AC087763.1-201ENST00000603391 286 ntBASIC6.87□□□□□ -1.31
NUP98P52948 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NUP98P52948 AC009163.6-201ENST00000612367 342 ntBASIC6.87□□□□□ -1.31
NUP98P52948 AP002799.1-201ENST00000623552 423 ntBASIC6.87□□□□□ -1.31
NUP98P52948 AC135068.5-201ENST00000624197 983 ntBASIC6.87□□□□□ -1.31
NUP98P52948 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.87□□□□□ -1.31
NUP98P52948 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.87□□□□□ -1.31
NUP98P52948 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
NUP98P52948 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NUP98P52948 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.87□□□□□ -1.31
NUP98P52948 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NUP98P52948 AC005225.5-201ENST00000623547 2225 ntBASIC6.86□□□□□ -1.31
NUP98P52948 OR55B1P-203ENST00000641518 2602 ntBASIC6.86□□□□□ -1.31
NUP98P52948 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NUP98P52948 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
NUP98P52948 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.86□□□□□ -1.31
NUP98P52948 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.86□□□□□ -1.31
NUP98P52948 OR10T1P-201ENST00000424327 947 ntBASIC6.86□□□□□ -1.31
NUP98P52948 AC092651.1-201ENST00000426110 312 ntBASIC6.86□□□□□ -1.31
NUP98P52948 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.86□□□□□ -1.31
NUP98P52948 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.86□□□□□ -1.31
NUP98P52948 HIGD1AP8-201ENST00000453927 274 ntBASIC6.86□□□□□ -1.31
NUP98P52948 AC091685.2-201ENST00000454924 864 ntBASIC6.86□□□□□ -1.31
NUP98P52948 RPL35AP28-201ENST00000459730 331 ntBASIC6.86□□□□□ -1.31
NUP98P52948 RN7SL610P-201ENST00000463845 291 ntBASIC6.86□□□□□ -1.31
NUP98P52948 AC004453.1-201ENST00000487895 408 ntBASIC6.86□□□□□ -1.31
NUP98P52948 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms