Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC7.67□□□□□ -1.18
LIG1P18858 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC7.67□□□□□ -1.18
LIG1P18858 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC7.67□□□□□ -1.18
LIG1P18858 DLGAP5P1-201ENST00000430307 464 ntBASIC7.67□□□□□ -1.18
LIG1P18858 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
LIG1P18858 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.67□□□□□ -1.18
LIG1P18858 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.67□□□□□ -1.18
LIG1P18858 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC7.67□□□□□ -1.18
LIG1P18858 EXTL2P1-201ENST00000446218 416 ntBASIC7.67□□□□□ -1.18
LIG1P18858 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC7.67□□□□□ -1.18
LIG1P18858 MYO5BP2-201ENST00000449815 1277 ntBASIC7.67□□□□□ -1.18
LIG1P18858 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC7.67□□□□□ -1.18
LIG1P18858 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.67□□□□□ -1.18
LIG1P18858 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC7.67□□□□□ -1.18
LIG1P18858 AC092754.2-201ENST00000463506 460 ntBASIC7.67□□□□□ -1.18
LIG1P18858 H3F3AP3-201ENST00000497682 407 ntBASIC7.67□□□□□ -1.18
LIG1P18858 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.67□□□□□ -1.18
LIG1P18858 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.67□□□□□ -1.18
LIG1P18858 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.67□□□□□ -1.18
LIG1P18858 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.67□□□□□ -1.18
LIG1P18858 KCTD9P4-201ENST00000526766 1166 ntBASIC7.67□□□□□ -1.18
LIG1P18858 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.67□□□□□ -1.18
LIG1P18858 AP002004.1-206ENST00000532441 876 ntBASIC7.67□□□□□ -1.18
LIG1P18858 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
LIG1P18858 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.67□□□□□ -1.18
LIG1P18858 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC7.67□□□□□ -1.18
LIG1P18858 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC7.67□□□□□ -1.18
LIG1P18858 MIR378C-201ENST00000578683 81 ntBASIC7.67□□□□□ -1.18
LIG1P18858 RPS27AP19-201ENST00000597285 458 ntBASIC7.67□□□□□ -1.18
LIG1P18858 RBM11P1-201ENST00000604951 799 ntBASIC7.67□□□□□ -1.18
LIG1P18858 AC022001.1-201ENST00000605193 268 ntBASIC7.67□□□□□ -1.18
LIG1P18858 OR2AS2P-201ENST00000606902 342 ntBASIC7.67□□□□□ -1.18
LIG1P18858 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.67□□□□□ -1.18
LIG1P18858 TUSC7.1-201ENST00000610969 165 ntBASIC7.67□□□□□ -1.18
LIG1P18858 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC7.67□□□□□ -1.18
LIG1P18858 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.67□□□□□ -1.18
LIG1P18858 AC092192.1-201ENST00000633154 1018 ntBASIC7.67□□□□□ -1.18
LIG1P18858 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
LIG1P18858 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LIG1P18858 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.67□□□□□ -1.18
LIG1P18858 TRIM53CP-201ENST00000531490 1354 ntBASIC7.67□□□□□ -1.18
LIG1P18858 AC116158.1-201ENST00000560231 2129 ntBASIC7.67□□□□□ -1.18
LIG1P18858 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LIG1P18858 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LIG1P18858 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LIG1P18858 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LIG1P18858 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.67□□□□□ -1.18
LIG1P18858 AC095050.2-201ENST00000510748 1458 ntBASIC7.67□□□□□ -1.18
LIG1P18858 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
LIG1P18858 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
LIG1P18858 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
LIG1P18858 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LIG1P18858 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.67□□□□□ -1.18
LIG1P18858 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LIG1P18858 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.67□□□□□ -1.18
LIG1P18858 NCOA4P2-201ENST00000340589 1813 ntBASIC7.66□□□□□ -1.18
LIG1P18858 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
LIG1P18858 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
LIG1P18858 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LIG1P18858 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LIG1P18858 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LIG1P18858 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LIG1P18858 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LIG1P18858 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
LIG1P18858 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
LIG1P18858 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
LIG1P18858 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC7.66□□□□□ -1.18
LIG1P18858 RAP1BP1-201ENST00000412709 553 ntBASIC7.66□□□□□ -1.18
LIG1P18858 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LIG1P18858 AL365203.2-201ENST00000423444 196 ntBASIC7.66□□□□□ -1.18
LIG1P18858 DEFB130D-201ENST00000426866 237 ntBASIC7.66□□□□□ -1.18
LIG1P18858 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.66□□□□□ -1.18
LIG1P18858 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC7.66□□□□□ -1.18
LIG1P18858 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC7.66□□□□□ -1.18
LIG1P18858 AL589880.1-201ENST00000448271 287 ntBASIC7.66□□□□□ -1.18
LIG1P18858 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC7.66□□□□□ -1.18
LIG1P18858 AC092824.1-201ENST00000483524 576 ntBASIC7.66□□□□□ -1.18
LIG1P18858 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC7.66□□□□□ -1.18
LIG1P18858 FTH1P8-201ENST00000498161 514 ntBASIC7.66□□□□□ -1.18
LIG1P18858 AC026414.1-201ENST00000504046 698 ntBASIC7.66□□□□□ -1.18
LIG1P18858 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC7.66□□□□□ -1.18
LIG1P18858 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.66□□□□□ -1.18
LIG1P18858 IGLC4-201ENST00000517690 248 ntBASIC7.66□□□□□ -1.18
LIG1P18858 AC105185.1-201ENST00000518705 535 ntBASIC7.66□□□□□ -1.18
LIG1P18858 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC7.66□□□□□ -1.18
LIG1P18858 CARSP2-201ENST00000520688 277 ntBASIC7.66□□□□□ -1.18
LIG1P18858 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
LIG1P18858 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LIG1P18858 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.66□□□□□ -1.18
LIG1P18858 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
LIG1P18858 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
LIG1P18858 RN7SL199P-201ENST00000578752 281 ntBASIC7.66□□□□□ -1.18
LIG1P18858 RN7SL656P-201ENST00000579044 281 ntBASIC7.66□□□□□ -1.18
LIG1P18858 RN7SL404P-201ENST00000582421 281 ntBASIC7.66□□□□□ -1.18
LIG1P18858 AP002360.4-201ENST00000606980 481 ntBASIC7.66□□□□□ -1.18
LIG1P18858 MIR6070-201ENST00000613967 103 ntBASIC7.66□□□□□ -1.18
LIG1P18858 AC073530.2-201ENST00000623987 261 ntBASIC7.66□□□□□ -1.18
LIG1P18858 UGP2-231ENST00000627474 264 ntTSL 5 BASIC7.66□□□□□ -1.18
LIG1P18858 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC7.66□□□□□ -1.18
LIG1P18858 AC140479.4-205ENST00000636339 820 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms