Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNF2P1-201ENST00000442955 1010 ntBASIC6.95□□□□□ -1.3
HLA-DOAP06340 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 RPS17P15-201ENST00000475609 349 ntBASIC6.95□□□□□ -1.3
HLA-DOAP06340 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 OR7E157P-201ENST00000494376 911 ntBASIC6.95□□□□□ -1.3
HLA-DOAP06340 MORF4L2P1-201ENST00000503761 858 ntBASIC6.95□□□□□ -1.3
HLA-DOAP06340 AC008628.1-201ENST00000508663 265 ntBASIC6.95□□□□□ -1.3
HLA-DOAP06340 TPT1P8-201ENST00000510120 555 ntBASIC6.95□□□□□ -1.3
HLA-DOAP06340 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HLA-DOAP06340 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 IGBP1P1-201ENST00000554337 1009 ntBASIC6.95□□□□□ -1.3
HLA-DOAP06340 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 DNAJC19P3-201ENST00000594491 331 ntBASIC6.95□□□□□ -1.3
HLA-DOAP06340 AC027449.1-201ENST00000608890 407 ntBASIC6.95□□□□□ -1.3
HLA-DOAP06340 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HLA-DOAP06340 AL731532.1-201ENST00000623972 4236 ntBASIC6.95□□□□□ -1.3
HLA-DOAP06340 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
HLA-DOAP06340 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
HLA-DOAP06340 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
HLA-DOAP06340 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HLA-DOAP06340 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HLA-DOAP06340 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
HLA-DOAP06340 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-DOAP06340 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-DOAP06340 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-DOAP06340 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-DOAP06340 MIR620-201ENST00000385232 95 ntBASIC6.94□□□□□ -1.3
HLA-DOAP06340 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 AL022331.1-201ENST00000429025 477 ntBASIC6.94□□□□□ -1.3
HLA-DOAP06340 HMGB3P24-201ENST00000433260 622 ntBASIC6.94□□□□□ -1.3
HLA-DOAP06340 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 RPS23P6-201ENST00000466136 431 ntBASIC6.94□□□□□ -1.3
HLA-DOAP06340 RN7SL214P-201ENST00000487317 265 ntBASIC6.94□□□□□ -1.3
HLA-DOAP06340 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 AP001885.1-201ENST00000621658 558 ntBASIC6.94□□□□□ -1.3
HLA-DOAP06340 AL691477.1-201ENST00000624398 162 ntBASIC6.94□□□□□ -1.3
HLA-DOAP06340 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 AC087269.2-201ENST00000641764 975 ntBASIC6.94□□□□□ -1.3
HLA-DOAP06340 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-DOAP06340 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-DOAP06340 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-DOAP06340 AP002833.3-201ENST00000625075 2265 ntBASIC6.94□□□□□ -1.3
HLA-DOAP06340 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-DOAP06340 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-DOAP06340 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 AC027279.1-201ENST00000568885 4284 ntBASIC6.94□□□□□ -1.3
HLA-DOAP06340 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HLA-DOAP06340 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.94□□□□□ -1.3
HLA-DOAP06340 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-DOAP06340 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-DOAP06340 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 MTCO2P17-201ENST00000424336 677 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 RPS12P17-201ENST00000438591 377 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 AL603882.1-201ENST00000463059 681 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 AL157777.1-201ENST00000468100 304 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-DOAP06340 AC108729.1-201ENST00000487812 947 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HLA-DOAP06340 RPL17P2-201ENST00000491913 451 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 AC093534.1-201ENST00000504977 132 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 RNA5SP362-201ENST00000516048 118 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 SCARNA6.1-201ENST00000516989 238 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.93□□□□□ -1.3
HLA-DOAP06340 IGLV3-30-201ENST00000524362 298 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 HMGB1P42-201ENST00000532126 553 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 AC007225.2-201ENST00000562529 256 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 AC234775.3-201ENST00000564612 656 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 MIR4505-201ENST00000582238 73 ntBASIC6.93□□□□□ -1.3
HLA-DOAP06340 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms