Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DRB4X5D2U9 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DRB4X5D2U9 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DRB4X5D2U9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DRB4X5D2U9 AC005224.3-201ENST00000584683 2140 ntBASIC4.4□□□□□ -1.71
HLA-DRB4X5D2U9 AL603750.1-201ENST00000624216 1717 ntBASIC4.4□□□□□ -1.71
HLA-DRB4X5D2U9 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HLA-DRB4X5D2U9 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DRB4X5D2U9 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DRB4X5D2U9 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DRB4X5D2U9 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 SELENOWP1-201ENST00000322792 252 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 RPL35AP3-201ENST00000414680 288 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 RPS4XP5-201ENST00000419038 768 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AC007679.3-201ENST00000434035 414 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 GEMIN2P1-201ENST00000454246 752 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AC069304.1-201ENST00000491593 704 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 RPS26P24-201ENST00000497656 331 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 RBBP4P1-201ENST00000502424 1276 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 TOMM22P4-201ENST00000511318 336 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 SETP21-201ENST00000514799 892 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 RN7SKP238-201ENST00000516483 249 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AC011853.1-201ENST00000518911 454 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AL163952.1-202ENST00000569625 600 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AC005244.1-201ENST00000582566 339 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 MIR6780B-201ENST00000610307 79 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AC007786.3-201ENST00000615154 596 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AL136228.1-201ENST00000622221 319 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AL031595.2-201ENST00000624215 19071 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 HSPA8P14-201ENST00000552265 1805 ntBASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DRB4X5D2U9 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 AL161756.3-201ENST00000641216 2071 ntBASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 AP001029.2-203ENST00000589795 4910 ntBASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 RN7SKP187-201ENST00000365536 330 ntBASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 ATP5LP2-201ENST00000440646 311 ntBASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 RNU1-88P-201ENST00000459274 128 ntBASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 RN7SL269P-201ENST00000467795 305 ntBASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 RPL38P3-201ENST00000484463 213 ntBASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 LSM3P4-201ENST00000502948 309 ntBASIC4.38□□□□□ -1.71
HLA-DRB4X5D2U9 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms