Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC021269.1-201ENST00000526860 705 ntBASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 SMIM12P1-201ENST00000603004 274 ntBASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 AL445670.1-201ENST00000618889 801 ntBASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 AC021766.1-201ENST00000624404 741 ntBASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCNB1IP1Q9NPC3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 RBBP4P5-201ENST00000398583 1266 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 YWHAZP6-201ENST00000399764 738 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 RPL12P12-201ENST00000424633 501 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 AC130360.1-201ENST00000425489 1117 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 AL590004.3-202ENST00000445883 451 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 HMGB1P7-201ENST00000450921 612 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 AC002553.3-201ENST00000453002 341 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 HMGN1P17-201ENST00000513734 295 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 RN7SKP5-201ENST00000517045 272 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 AC130365.2-201ENST00000525882 1201 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 MRPS21P8-201ENST00000569196 235 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 MIR3154-201ENST00000577829 84 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 uc_338.26-201ENST00000612659 160 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 FAM27E2-201ENST00000619668 403 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 AL357140.4-201ENST00000636827 412 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC02019-201ENST00000608605 2060 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 MAPK10-328ENST00000641553 4009 ntBASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNB1IP1Q9NPC3 ABCC13-202ENST00000463099 3842 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 RNA5SP232-201ENST00000364144 119 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 RNA5SP91-201ENST00000390902 119 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 RNA5SP431-201ENST00000410312 120 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 RNA5SP198-201ENST00000410376 127 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 RN7SKP86-201ENST00000410454 332 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 RPL35AP31-201ENST00000418340 337 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 AC009784.1-201ENST00000426484 460 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 AL359265.1-201ENST00000440296 795 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 SEPT14P12-201ENST00000442280 560 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 RNU1-88P-201ENST00000459274 128 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 SNORD125-201ENST00000459538 96 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 AC006539.1-201ENST00000481419 501 ntBASIC5.35□□□□□ -1.55
CCNB1IP1Q9NPC3 RPL38P3-201ENST00000484463 213 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms