Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 AC110602.1-201ENST00000437414 318 ntBASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 AC093166.4-201ENST00000457867 318 ntBASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 RPS23P2-201ENST00000463671 415 ntBASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 DUTP1-201ENST00000493631 470 ntBASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 SETP21-201ENST00000514799 892 ntBASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 AC097486.1-201ENST00000515331 210 ntBASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 WBP1LP3-201ENST00000523033 208 ntBASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 SAMM50P1-201ENST00000455403 1399 ntBASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 AC027088.4-201ENST00000611559 1947 ntBASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 AF287957.1-201ENST00000607368 1595 ntBASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 CASC19-238ENST00000641523 1558 ntBASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 AC093225.1-201ENST00000506867 1408 ntBASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 RN7SKP206-201ENST00000410823 293 ntBASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 AL354890.1-201ENST00000413730 346 ntBASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 RPS29P14-201ENST00000431518 171 ntBASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 LYPLA1P1-201ENST00000434514 622 ntBASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 ATP5LP2-201ENST00000440646 311 ntBASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 SETP20-201ENST00000457046 852 ntBASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 RN7SL57P-201ENST00000493687 290 ntBASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 SCARNA18.1-201ENST00000516330 83 ntBASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 AC137627.1-201ENST00000545761 289 ntBASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 NPM1P45-201ENST00000583151 559 ntBASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 AP001437.1-201ENST00000608783 456 ntBASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 AC108673.3-201ENST00000609183 335 ntBASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRTM1Q9HBL6 AC092451.3-201ENST00000625067 1343 ntBASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 SNORA51.1-201ENST00000363243 140 ntBASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 RN7SKP275-201ENST00000364626 301 ntBASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 MIR130A-201ENST00000385274 89 ntBASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 AL357752.1-201ENST00000412817 349 ntBASIC5.5□□□□□ -1.53
LRTM1Q9HBL6 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms