Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL139421.1-201ENST00000423010 169 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC009263.1-201ENST00000441193 1239 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 TIMM8BP2-201ENST00000445940 251 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC009961.3-201ENST00000449832 765 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AL606490.1-201ENST00000452266 765 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AKR1D1P1-201ENST00000457236 936 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 RPL7P48-201ENST00000461513 746 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 MTCYBP16-201ENST00000509187 1129 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC117532.1-201ENST00000514638 323 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 NPIPB14P-203ENST00000532298 987 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 DPRXP4-201ENST00000578053 568 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 BNIP3P26-201ENST00000600827 554 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC064872.1-201ENST00000604823 1072 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC100767.2-201ENST00000604840 693 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC090525.3-201ENST00000605601 189 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC068726.1-201ENST00000610993 341 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AL353726.1-201ENST00000614041 1000 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC073534.2-201ENST00000620377 381 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC091931.1-201ENST00000623488 728 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 LINC00663-203ENST00000586885 2546 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 ECM1P2-201ENST00000503354 1577 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 DLEU2L-201ENST00000371086 3555 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AC006141.1-201ENST00000581917 2170 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 BX284613.1-201ENST00000452221 1641 ntBASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS4Q8IUM7 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 AP005901.5-201ENST00000545779 1796 ntBASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 Y_RNA.192-201ENST00000363977 102 ntBASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 RNU4-24P-201ENST00000364565 139 ntBASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 RNA5SP85-201ENST00000365378 119 ntBASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 AL512329.1-201ENST00000404600 1592 ntBASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 AL355375.1-201ENST00000405686 392 ntBASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 AC245060.4-201ENST00000413293 1121 ntBASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 NANOGP4-201ENST00000427230 913 ntBASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 GAPDHP37-201ENST00000442317 968 ntBASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 GAPDHP20-201ENST00000444107 1007 ntBASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 SYPL1P1-201ENST00000473622 768 ntBASIC7.48□□□□□ -1.21
NPAS4Q8IUM7 AC099340.1-201ENST00000475247 599 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms