Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRRC28Q86X40 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.16□□□□□ -1.58
LRRC28Q86X40 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRC28Q86X40 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.16□□□□□ -1.58
LRRC28Q86X40 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRC28Q86X40 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRC28Q86X40 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRC28Q86X40 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
LRRC28Q86X40 AL132656.3-201ENST00000606384 1595 ntBASIC5.16□□□□□ -1.58
LRRC28Q86X40 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
LRRC28Q86X40 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
LRRC28Q86X40 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
LRRC28Q86X40 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRC28Q86X40 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
LRRC28Q86X40 AC023632.6-201ENST00000624338 2177 ntBASIC5.15□□□□□ -1.58
LRRC28Q86X40 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRC28Q86X40 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
LRRC28Q86X40 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
LRRC28Q86X40 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRC28Q86X40 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.15□□□□□ -1.58
LRRC28Q86X40 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRC28Q86X40 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.15□□□□□ -1.58
LRRC28Q86X40 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
LRRC28Q86X40 MAPK10-328ENST00000641553 4009 ntBASIC5.15□□□□□ -1.58
LRRC28Q86X40 QRSL1P1-201ENST00000400977 1540 ntBASIC5.15□□□□□ -1.58
LRRC28Q86X40 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRC28Q86X40 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LRRC28Q86X40 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LRRC28Q86X40 AC004386.1-201ENST00000393214 761 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LRRC28Q86X40 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 RPS7P8-201ENST00000418311 581 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 RPS15AP30-201ENST00000420976 390 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 AC115283.1-201ENST00000427353 400 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 AC002069.1-201ENST00000429649 1159 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 TRIM60P16-201ENST00000444048 694 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LRRC28Q86X40 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 AC098847.1-201ENST00000473094 348 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 RNA5SP230-201ENST00000517039 122 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 IGKV3D-25-201ENST00000519599 235 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 AC021269.1-201ENST00000526860 705 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LRRC28Q86X40 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 MIR4660-201ENST00000583549 74 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 OR51C1P-201ENST00000608504 942 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 AL162574.1-201ENST00000615702 950 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 MIR6778-201ENST00000617912 73 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.15□□□□□ -1.59
LRRC28Q86X40 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LRRC28Q86X40 AL354854.1-201ENST00000455940 1363 ntBASIC5.15□□□□□ -1.59
LRRC28Q86X40 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LRRC28Q86X40 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
LRRC28Q86X40 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRRC28Q86X40 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRRC28Q86X40 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRRC28Q86X40 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.14□□□□□ -1.59
LRRC28Q86X40 AC011933.2-201ENST00000578539 2790 ntBASIC5.14□□□□□ -1.59
LRRC28Q86X40 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRC28Q86X40 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRC28Q86X40 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRC28Q86X40 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRRC28Q86X40 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRC28Q86X40 RNU105B-201ENST00000364478 208 ntBASIC5.14□□□□□ -1.59
LRRC28Q86X40 RN7SKP275-201ENST00000364626 301 ntBASIC5.14□□□□□ -1.59
LRRC28Q86X40 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.14□□□□□ -1.59
LRRC28Q86X40 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
LRRC28Q86X40 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LRRC28Q86X40 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.14□□□□□ -1.59
LRRC28Q86X40 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.14□□□□□ -1.59
LRRC28Q86X40 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.14□□□□□ -1.59
LRRC28Q86X40 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LRRC28Q86X40 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.14□□□□□ -1.59
LRRC28Q86X40 ATP5LP2-201ENST00000440646 311 ntBASIC5.14□□□□□ -1.59
LRRC28Q86X40 RPS10P18-201ENST00000442662 495 ntBASIC5.14□□□□□ -1.59
LRRC28Q86X40 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms