Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKDCP78527 IGHVIII-76-1-201ENST00000523776 286 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKDCP78527 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC3.88□□□□□ -1.79
PRKDCP78527 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKDCP78527 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC3.88□□□□□ -1.79
PRKDCP78527 UGT2B27P-201ENST00000505092 1620 ntBASIC3.88□□□□□ -1.79
PRKDCP78527 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRKDCP78527 KCNB1-201ENST00000371741 11879 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
PRKDCP78527 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
PRKDCP78527 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 RGMA-201ENST00000329082 11350 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PRKDCP78527 RN7SKP224-201ENST00000364140 325 ntBASIC3.87□□□□□ -1.79
PRKDCP78527 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
PRKDCP78527 RNU6-761P-201ENST00000384148 107 ntBASIC3.87□□□□□ -1.79
PRKDCP78527 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.87□□□□□ -1.79
PRKDCP78527 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC3.87□□□□□ -1.79
PRKDCP78527 RPL6P5-201ENST00000445678 828 ntBASIC3.87□□□□□ -1.79
PRKDCP78527 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.87□□□□□ -1.79
PRKDCP78527 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.87□□□□□ -1.79
PRKDCP78527 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC3.87□□□□□ -1.79
PRKDCP78527 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC3.87□□□□□ -1.79
PRKDCP78527 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC3.87□□□□□ -1.79
PRKDCP78527 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC3.87□□□□□ -1.79
PRKDCP78527 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC3.87□□□□□ -1.79
PRKDCP78527 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC3.87□□□□□ -1.79
PRKDCP78527 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
PRKDCP78527 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PRKDCP78527 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 MED12-203ENST00000374102 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC3.87□□□□□ -1.79
PRKDCP78527 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.87□□□□□ -1.79
PRKDCP78527 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.87□□□□□ -1.79
PRKDCP78527 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC3.87□□□□□ -1.79
PRKDCP78527 RPL12P20-201ENST00000475538 479 ntBASIC3.87□□□□□ -1.79
PRKDCP78527 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC3.87□□□□□ -1.79
PRKDCP78527 OR5M2P-201ENST00000529003 936 ntBASIC3.87□□□□□ -1.79
PRKDCP78527 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.87□□□□□ -1.79
PRKDCP78527 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC3.87□□□□□ -1.79
PRKDCP78527 AC116631.1-202ENST00000640984 683 ntBASIC3.87□□□□□ -1.79
PRKDCP78527 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC3.87□□□□□ -1.79
PRKDCP78527 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
PRKDCP78527 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 AL589993.1-201ENST00000407450 2524 ntBASIC3.87□□□□□ -1.79
PRKDCP78527 PDP2-201ENST00000311765 7146 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 AC010928.1-201ENST00000592477 1447 ntBASIC3.87□□□□□ -1.79
PRKDCP78527 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 AC006213.6-201ENST00000623722 4179 ntBASIC3.87□□□□□ -1.79
PRKDCP78527 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PRKDCP78527 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC3.87□□□□□ -1.79
PRKDCP78527 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC3.87□□□□□ -1.79
PRKDCP78527 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.87□□□□□ -1.79
PRKDCP78527 RNA5SP28-201ENST00000363841 119 ntBASIC3.87□□□□□ -1.79
PRKDCP78527 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC3.87□□□□□ -1.79
PRKDCP78527 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.87□□□□□ -1.79
PRKDCP78527 EI24P4-201ENST00000423683 1078 ntBASIC3.87□□□□□ -1.79
PRKDCP78527 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC3.87□□□□□ -1.79
PRKDCP78527 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.87□□□□□ -1.79
PRKDCP78527 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.87□□□□□ -1.79
PRKDCP78527 RNA5SP43-201ENST00000516559 110 ntBASIC3.87□□□□□ -1.79
PRKDCP78527 SNORA67.7-201ENST00000516664 135 ntBASIC3.87□□□□□ -1.79
PRKDCP78527 RNA5SP392-201ENST00000516905 112 ntBASIC3.87□□□□□ -1.79
PRKDCP78527 AC004232.3-201ENST00000622977 525 ntBASIC3.87□□□□□ -1.79
PRKDCP78527 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
PRKDCP78527 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PRKDCP78527 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PRKDCP78527 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC3.87□□□□□ -1.79
PRKDCP78527 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC3.87□□□□□ -1.79
PRKDCP78527 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRKDCP78527 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 ZDHHC21-201ENST00000380916 9160 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKDCP78527 RN7SKP151-201ENST00000410230 316 ntBASIC3.86□□□□□ -1.79
PRKDCP78527 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 OR13C1P-201ENST00000457612 963 ntBASIC3.86□□□□□ -1.79
PRKDCP78527 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC3.86□□□□□ -1.79
PRKDCP78527 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.86□□□□□ -1.79
PRKDCP78527 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRKDCP78527 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.86□□□□□ -1.79
PRKDCP78527 AC007224.1-201ENST00000564410 144 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms