Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNU6-1102P-201ENST00000516149 96 ntBASIC5.57□□□□□ -1.52
CDH12P55289 SNORA74.1-201ENST00000516320 180 ntBASIC5.57□□□□□ -1.52
CDH12P55289 RNU6-889P-201ENST00000517189 103 ntBASIC5.57□□□□□ -1.52
CDH12P55289 VTA1P2-201ENST00000520205 911 ntBASIC5.57□□□□□ -1.52
CDH12P55289 AC136777.2-201ENST00000522979 358 ntBASIC5.57□□□□□ -1.52
CDH12P55289 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.57□□□□□ -1.52
CDH12P55289 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH12P55289 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH12P55289 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 AC005632.2-201ENST00000564271 828 ntBASIC5.57□□□□□ -1.52
CDH12P55289 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH12P55289 CCDC58P1-201ENST00000578567 430 ntBASIC5.57□□□□□ -1.52
CDH12P55289 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH12P55289 AL133247.2-201ENST00000603236 482 ntBASIC5.57□□□□□ -1.52
CDH12P55289 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH12P55289 AC011891.2-201ENST00000604949 397 ntBASIC5.57□□□□□ -1.52
CDH12P55289 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.57□□□□□ -1.52
CDH12P55289 uc_338.26-201ENST00000612659 160 ntBASIC5.57□□□□□ -1.52
CDH12P55289 MIR6774-201ENST00000614651 70 ntBASIC5.57□□□□□ -1.52
CDH12P55289 AC009269.6-201ENST00000621778 588 ntBASIC5.57□□□□□ -1.52
CDH12P55289 AC079298.2-201ENST00000623885 459 ntBASIC5.57□□□□□ -1.52
CDH12P55289 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH12P55289 AC009452.1-201ENST00000640823 606 ntBASIC5.57□□□□□ -1.52
CDH12P55289 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH12P55289 AL355834.1-201ENST00000556602 3965 ntBASIC5.57□□□□□ -1.52
CDH12P55289 AC018717.1-201ENST00000457712 1505 ntBASIC5.57□□□□□ -1.52
CDH12P55289 Z95114.1-201ENST00000624264 14574 ntBASIC5.57□□□□□ -1.52
CDH12P55289 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH12P55289 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
CDH12P55289 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH12P55289 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CDH12P55289 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CDH12P55289 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH12P55289 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH12P55289 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH12P55289 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 THAP12P9-201ENST00000503971 2360 ntBASIC5.56□□□□□ -1.52
CDH12P55289 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CDH12P55289 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH12P55289 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CDH12P55289 AC004076.2-201ENST00000620532 3323 ntBASIC5.56□□□□□ -1.52
CDH12P55289 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
CDH12P55289 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 RAB5CP1-201ENST00000395972 580 ntBASIC5.56□□□□□ -1.52
CDH12P55289 AL035405.1-201ENST00000400795 710 ntBASIC5.56□□□□□ -1.52
CDH12P55289 AL133260.1-201ENST00000405720 405 ntBASIC5.56□□□□□ -1.52
CDH12P55289 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 RN7SKP144-201ENST00000411108 279 ntBASIC5.56□□□□□ -1.52
CDH12P55289 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 AC245096.1-201ENST00000413104 546 ntBASIC5.56□□□□□ -1.52
CDH12P55289 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.56□□□□□ -1.52
CDH12P55289 AL354868.1-201ENST00000417077 482 ntBASIC5.56□□□□□ -1.52
CDH12P55289 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 SFR1P2-201ENST00000421841 730 ntBASIC5.56□□□□□ -1.52
CDH12P55289 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CDH12P55289 OR3D1P-201ENST00000438288 955 ntBASIC5.56□□□□□ -1.52
CDH12P55289 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH12P55289 RPSAP40-201ENST00000442343 891 ntBASIC5.56□□□□□ -1.52
CDH12P55289 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH12P55289 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 AC078857.1-201ENST00000469870 667 ntBASIC5.56□□□□□ -1.52
CDH12P55289 PPP1R11P1-201ENST00000486095 376 ntBASIC5.56□□□□□ -1.52
CDH12P55289 EIF4E2P2-201ENST00000492033 736 ntBASIC5.56□□□□□ -1.52
CDH12P55289 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 AC010468.3-201ENST00000508225 458 ntBASIC5.56□□□□□ -1.52
CDH12P55289 AC090958.1-201ENST00000511122 351 ntBASIC5.56□□□□□ -1.52
CDH12P55289 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH12P55289 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 AC023310.2-201ENST00000553844 547 ntBASIC5.56□□□□□ -1.52
CDH12P55289 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH12P55289 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH12P55289 AC104072.1-201ENST00000568817 668 ntBASIC5.56□□□□□ -1.52
CDH12P55289 AC027216.1-201ENST00000577726 685 ntBASIC5.56□□□□□ -1.52
CDH12P55289 MIMT1-201ENST00000597105 1050 ntBASIC5.56□□□□□ -1.52
CDH12P55289 AP001823.1-201ENST00000604056 1003 ntBASIC5.56□□□□□ -1.52
CDH12P55289 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH12P55289 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDH12P55289 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.56□□□□□ -1.52
CDH12P55289 SNX18P12-201ENST00000624821 759 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms