Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
GPC3P51654 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.46□□□□□ -1.38
GPC3P51654 MTCO1P11-201ENST00000429111 1528 ntBASIC6.45□□□□□ -1.38
GPC3P51654 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
GPC3P51654 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
GPC3P51654 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.45□□□□□ -1.38
GPC3P51654 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.45□□□□□ -1.38
GPC3P51654 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
GPC3P51654 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
GPC3P51654 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
GPC3P51654 AC130304.1-201ENST00000622942 2385 ntBASIC6.45□□□□□ -1.38
GPC3P51654 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
GPC3P51654 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.45□□□□□ -1.38
GPC3P51654 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
GPC3P51654 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.45□□□□□ -1.38
GPC3P51654 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
GPC3P51654 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
GPC3P51654 RN7SKP229-201ENST00000410465 302 ntBASIC6.45□□□□□ -1.38
GPC3P51654 RN7SKP293-201ENST00000411389 296 ntBASIC6.45□□□□□ -1.38
GPC3P51654 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.45□□□□□ -1.38
GPC3P51654 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.45□□□□□ -1.38
GPC3P51654 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.45□□□□□ -1.38
GPC3P51654 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.45□□□□□ -1.38
GPC3P51654 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.45□□□□□ -1.38
GPC3P51654 YWHAEP1-201ENST00000453697 763 ntBASIC6.45□□□□□ -1.38
GPC3P51654 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.45□□□□□ -1.38
GPC3P51654 RPS23P6-201ENST00000466136 431 ntBASIC6.45□□□□□ -1.38
GPC3P51654 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.45□□□□□ -1.38
GPC3P51654 AC093719.1-201ENST00000480427 441 ntBASIC6.45□□□□□ -1.38
GPC3P51654 TOMM22P4-201ENST00000511318 336 ntBASIC6.45□□□□□ -1.38
GPC3P51654 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
GPC3P51654 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
GPC3P51654 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.45□□□□□ -1.38
GPC3P51654 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.45□□□□□ -1.38
GPC3P51654 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.45□□□□□ -1.38
GPC3P51654 AC004477.3-201ENST00000614061 590 ntBASIC6.45□□□□□ -1.38
GPC3P51654 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.45□□□□□ -1.38
GPC3P51654 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.45□□□□□ -1.38
GPC3P51654 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
GPC3P51654 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
GPC3P51654 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
GPC3P51654 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.45□□□□□ -1.38
GPC3P51654 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
GPC3P51654 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
GPC3P51654 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
GPC3P51654 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GPC3P51654 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
GPC3P51654 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.44□□□□□ -1.38
GPC3P51654 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GPC3P51654 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
GPC3P51654 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.44□□□□□ -1.38
GPC3P51654 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.44□□□□□ -1.38
GPC3P51654 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.44□□□□□ -1.38
GPC3P51654 DEFA9P-201ENST00000433042 285 ntBASIC6.44□□□□□ -1.38
GPC3P51654 DNAJC19P5-201ENST00000443295 316 ntBASIC6.44□□□□□ -1.38
GPC3P51654 RPSAP39-201ENST00000467439 883 ntBASIC6.44□□□□□ -1.38
GPC3P51654 PFN1P6-201ENST00000476786 399 ntBASIC6.44□□□□□ -1.38
GPC3P51654 RPL38P3-201ENST00000484463 213 ntBASIC6.44□□□□□ -1.38
GPC3P51654 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.44□□□□□ -1.38
GPC3P51654 TRBV5-2-201ENST00000489095 273 ntBASIC6.44□□□□□ -1.38
GPC3P51654 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.44□□□□□ -1.38
GPC3P51654 RN7SKP288-201ENST00000516227 268 ntBASIC6.44□□□□□ -1.38
GPC3P51654 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.44□□□□□ -1.38
GPC3P51654 DPPA2P4-201ENST00000563717 878 ntBASIC6.44□□□□□ -1.38
GPC3P51654 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.44□□□□□ -1.38
GPC3P51654 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.44□□□□□ -1.38
GPC3P51654 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.44□□□□□ -1.38
GPC3P51654 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.44□□□□□ -1.38
GPC3P51654 AC109309.2-201ENST00000612597 332 ntBASIC6.44□□□□□ -1.38
GPC3P51654 AL445670.1-201ENST00000618889 801 ntBASIC6.44□□□□□ -1.38
GPC3P51654 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
GPC3P51654 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GPC3P51654 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GPC3P51654 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
GPC3P51654 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.44□□□□□ -1.38
GPC3P51654 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
GPC3P51654 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.44□□□□□ -1.38
GPC3P51654 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
GPC3P51654 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.44□□□□□ -1.38
GPC3P51654 AC005224.3-201ENST00000584683 2140 ntBASIC6.44□□□□□ -1.38
GPC3P51654 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GPC3P51654 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
GPC3P51654 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
GPC3P51654 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
GPC3P51654 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GPC3P51654 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
GPC3P51654 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
GPC3P51654 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
GPC3P51654 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
GPC3P51654 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
GPC3P51654 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.43□□□□□ -1.38
GPC3P51654 GTF2IP4-201ENST00000453092 2054 ntBASIC6.43□□□□□ -1.38
GPC3P51654 AC027279.4-201ENST00000624371 2072 ntBASIC6.43□□□□□ -1.38
GPC3P51654 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.43□□□□□ -1.38
GPC3P51654 AC116158.1-201ENST00000560231 2129 ntBASIC6.43□□□□□ -1.38
GPC3P51654 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
GPC3P51654 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
GPC3P51654 SNORA64.1-201ENST00000362600 132 ntBASIC6.43□□□□□ -1.38
GPC3P51654 AC005522.1-201ENST00000395416 346 ntBASIC6.43□□□□□ -1.38
GPC3P51654 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms