Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MIR6837-201ENST00000620884 64 ntBASIC8.24□□□□□ -1.09
RXRBP28702 AC010435.1-201ENST00000623353 1177 ntBASIC8.24□□□□□ -1.09
RXRBP28702 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RXRBP28702 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RXRBP28702 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RXRBP28702 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.24□□□□□ -1.09
RXRBP28702 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RXRBP28702 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
RXRBP28702 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC8.24□□□□□ -1.09
RXRBP28702 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.24□□□□□ -1.09
RXRBP28702 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.24□□□□□ -1.09
RXRBP28702 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.24□□□□□ -1.09
RXRBP28702 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
RXRBP28702 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RXRBP28702 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RXRBP28702 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RXRBP28702 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RXRBP28702 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RXRBP28702 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.24□□□□□ -1.09
RXRBP28702 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
RXRBP28702 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
RXRBP28702 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RXRBP28702 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RXRBP28702 CASC19-248ENST00000641674 1356 ntBASIC8.23□□□□□ -1.09
RXRBP28702 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RXRBP28702 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RXRBP28702 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RXRBP28702 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
RXRBP28702 AL035555.1-201ENST00000404462 1790 ntBASIC8.23□□□□□ -1.09
RXRBP28702 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RXRBP28702 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.23□□□□□ -1.09
RXRBP28702 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RXRBP28702 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RXRBP28702 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC8.23□□□□□ -1.09
RXRBP28702 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
RXRBP28702 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RXRBP28702 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RXRBP28702 RNU5E-10P-201ENST00000363506 118 ntBASIC8.23□□□□□ -1.09
RXRBP28702 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC8.23□□□□□ -1.09
RXRBP28702 Y_RNA.604-201ENST00000410574 102 ntBASIC8.23□□□□□ -1.09
RXRBP28702 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC8.23□□□□□ -1.09
RXRBP28702 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC8.23□□□□□ -1.09
RXRBP28702 MTCO3P4-201ENST00000419236 787 ntBASIC8.23□□□□□ -1.09
RXRBP28702 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC8.23□□□□□ -1.09
RXRBP28702 RPS3AP44-201ENST00000425466 790 ntBASIC8.23□□□□□ -1.09
RXRBP28702 USP9YP11-201ENST00000427537 717 ntBASIC8.23□□□□□ -1.09
RXRBP28702 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.23□□□□□ -1.09
RXRBP28702 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC8.23□□□□□ -1.09
RXRBP28702 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC8.23□□□□□ -1.09
RXRBP28702 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC8.23□□□□□ -1.09
RXRBP28702 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC8.23□□□□□ -1.09
RXRBP28702 RN7SL423P-201ENST00000486202 304 ntBASIC8.23□□□□□ -1.09
RXRBP28702 AC007686.1-201ENST00000488511 463 ntBASIC8.23□□□□□ -1.09
RXRBP28702 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RXRBP28702 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC8.23□□□□□ -1.09
RXRBP28702 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC8.23□□□□□ -1.09
RXRBP28702 AC024558.1-201ENST00000505008 528 ntBASIC8.23□□□□□ -1.09
RXRBP28702 RNU6-1102P-201ENST00000516149 96 ntBASIC8.23□□□□□ -1.09
RXRBP28702 RNU4-18P-201ENST00000516751 149 ntBASIC8.23□□□□□ -1.09
RXRBP28702 AC104997.1-201ENST00000519761 717 ntBASIC8.23□□□□□ -1.09
RXRBP28702 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC8.23□□□□□ -1.09
RXRBP28702 MIR4436B2-201ENST00000581415 91 ntBASIC8.23□□□□□ -1.09
RXRBP28702 MIR4436B1-201ENST00000583272 91 ntBASIC8.23□□□□□ -1.09
RXRBP28702 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
RXRBP28702 AC021171.1-201ENST00000603137 706 ntBASIC8.23□□□□□ -1.09
RXRBP28702 AC091768.1-201ENST00000609258 930 ntBASIC8.23□□□□□ -1.09
RXRBP28702 MIR378J-201ENST00000611988 109 ntBASIC8.23□□□□□ -1.09
RXRBP28702 AL355073.2-201ENST00000612106 557 ntBASIC8.23□□□□□ -1.09
RXRBP28702 AC119674.1-201ENST00000641611 1210 ntBASIC8.23□□□□□ -1.09
RXRBP28702 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
RXRBP28702 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RXRBP28702 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
RXRBP28702 Z93929.1-201ENST00000418200 1475 ntBASIC8.23□□□□□ -1.09
RXRBP28702 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
RXRBP28702 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RXRBP28702 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RXRBP28702 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RXRBP28702 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RXRBP28702 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC8.23□□□□□ -1.09
RXRBP28702 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC8.23□□□□□ -1.09
RXRBP28702 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.23□□□□□ -1.09
RXRBP28702 AC025263.3-201ENST00000622965 1396 ntBASIC8.22□□□□□ -1.09
RXRBP28702 AL359396.1-201ENST00000623151 2376 ntBASIC8.22□□□□□ -1.09
RXRBP28702 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
RXRBP28702 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
RXRBP28702 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
RXRBP28702 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC8.22□□□□□ -1.09
RXRBP28702 FTO-215ENST00000636491 1676 ntTSL 5 BASIC8.22□□□□□ -1.09
RXRBP28702 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RXRBP28702 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
RXRBP28702 RNU1-49P-201ENST00000363468 159 ntBASIC8.22□□□□□ -1.09
RXRBP28702 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
RXRBP28702 AL596448.1-201ENST00000415024 392 ntBASIC8.22□□□□□ -1.09
RXRBP28702 RPS7P8-201ENST00000418311 581 ntBASIC8.22□□□□□ -1.09
RXRBP28702 TCEA1P2-201ENST00000420496 906 ntBASIC8.22□□□□□ -1.09
RXRBP28702 AC127526.2-201ENST00000426436 775 ntBASIC8.22□□□□□ -1.09
RXRBP28702 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC8.22□□□□□ -1.09
RXRBP28702 Z73417.1-201ENST00000447373 778 ntBASIC8.22□□□□□ -1.09
RXRBP28702 AL445466.1-201ENST00000448432 357 ntBASIC8.22□□□□□ -1.09
RXRBP28702 RPS23P9-201ENST00000448848 438 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms