Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AP005262.1-201ENST00000582646 997 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AL591167.1-201ENST00000607321 456 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 HSPD1P7-201ENST00000447985 1686 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 MTCO1P7-201ENST00000419523 1542 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AL731566.1-201ENST00000620490 1937 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 OR7A2P-201ENST00000304105 930 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 RNA5SP485-201ENST00000365053 119 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AC026310.1-201ENST00000396004 378 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AL050305.1-201ENST00000399993 1230 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 RPS7P8-201ENST00000418311 581 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 RPS7P14-201ENST00000426405 583 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AC099677.3-201ENST00000427081 395 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 EIF5AP4-201ENST00000441206 465 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AL031681.1-201ENST00000443304 400 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AC245291.3-201ENST00000443400 292 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AC234771.2-201ENST00000445718 597 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 RPS18P1-201ENST00000447840 458 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AC093816.1-201ENST00000515076 913 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 ADAM3B-201ENST00000569937 840 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AC133552.4-201ENST00000576103 676 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AC107993.1-201ENST00000591343 684 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AL356608.1-201ENST00000610034 820 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 MIR6849-201ENST00000618543 69 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AL357153.4-201ENST00000620487 1016 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AL132656.3-201ENST00000606384 1595 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 MFSD8-239ENST00000641590 2479 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DQA1P01909 AL138820.1-201ENST00000617901 5305 ntBASIC4.31□□□□□ -1.72
HLA-DQA1P01909 TET1P1-201ENST00000426627 2301 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 AC022417.1-201ENST00000624768 1303 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 OR4F13P-202ENST00000560066 2054 ntBASIC4.3□□□□□ -1.72
HLA-DQA1P01909 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DQA1P01909 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms