Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
USH2AO75445 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
USH2AO75445 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
USH2AO75445 ACOT11-202ENST00000371316 6369 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
USH2AO75445 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
USH2AO75445 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
USH2AO75445 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
USH2AO75445 AC023141.6-201ENST00000429418 337 ntBASIC2.42□□□□□ -2.02
USH2AO75445 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC2.42□□□□□ -2.02
USH2AO75445 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC2.42□□□□□ -2.02
USH2AO75445 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
USH2AO75445 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC2.42□□□□□ -2.02
USH2AO75445 RNA5SP392-201ENST00000516905 112 ntBASIC2.42□□□□□ -2.02
USH2AO75445 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC2.42□□□□□ -2.02
USH2AO75445 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
USH2AO75445 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
USH2AO75445 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
USH2AO75445 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC2.42□□□□□ -2.02
USH2AO75445 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC2.42□□□□□ -2.02
USH2AO75445 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC2.42□□□□□ -2.02
USH2AO75445 PIK3C2B-204ENST00000424712 7522 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 THSD7B-203ENST00000413152 5846 ntTSL 5 BASIC2.41□□□□□ -2.02
USH2AO75445 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC2.41□□□□□ -2.02
USH2AO75445 PRDM15-202ENST00000398548 6654 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC2.41□□□□□ -2.02
USH2AO75445 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC2.41□□□□□ -2.02
USH2AO75445 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
USH2AO75445 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 OR6C69P-201ENST00000394268 893 ntBASIC2.41□□□□□ -2.02
USH2AO75445 AC233289.1-201ENST00000403700 508 ntBASIC2.41□□□□□ -2.02
USH2AO75445 CCDC11P1-201ENST00000503137 1162 ntBASIC2.41□□□□□ -2.02
USH2AO75445 AC105384.2-201ENST00000508433 640 ntBASIC2.41□□□□□ -2.02
USH2AO75445 RNU1-103P-201ENST00000516502 125 ntBASIC2.41□□□□□ -2.02
USH2AO75445 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC2.41□□□□□ -2.02
USH2AO75445 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC2.41□□□□□ -2.02
USH2AO75445 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC2.41□□□□□ -2.02
USH2AO75445 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC2.41□□□□□ -2.02
USH2AO75445 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC2.41□□□□□ -2.02
USH2AO75445 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
USH2AO75445 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC2.41□□□□□ -2.02
USH2AO75445 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 MAPK10-304ENST00000641341 3984 ntBASIC2.41□□□□□ -2.02
USH2AO75445 MSL3P1-202ENST00000440028 1468 ntBASIC2.41□□□□□ -2.02
USH2AO75445 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
USH2AO75445 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC2.41□□□□□ -2.02
USH2AO75445 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC2.41□□□□□ -2.02
USH2AO75445 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 KARSP3-201ENST00000571212 1504 ntBASIC2.41□□□□□ -2.02
USH2AO75445 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC2.41□□□□□ -2.02
USH2AO75445 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC2.41□□□□□ -2.02
USH2AO75445 TMEM33-203ENST00000504986 7482 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 GAPDHP42-201ENST00000406848 981 ntBASIC2.41□□□□□ -2.02
USH2AO75445 RCC2P2-201ENST00000422174 918 ntBASIC2.41□□□□□ -2.02
USH2AO75445 AC093414.1-201ENST00000434712 514 ntBASIC2.41□□□□□ -2.02
USH2AO75445 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC2.41□□□□□ -2.02
USH2AO75445 AC073581.1-201ENST00000519036 575 ntBASIC2.41□□□□□ -2.02
USH2AO75445 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC2.41□□□□□ -2.02
USH2AO75445 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC2.41□□□□□ -2.02
USH2AO75445 AL356218.2-201ENST00000605264 187 ntBASIC2.41□□□□□ -2.02
USH2AO75445 AL132640.3-201ENST00000630473 177 ntBASIC2.41□□□□□ -2.02
USH2AO75445 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
USH2AO75445 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
USH2AO75445 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC2.41□□□□□ -2.02
USH2AO75445 AL080317.3-201ENST00000607434 4315 ntBASIC2.41□□□□□ -2.02
USH2AO75445 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 SPTAN1-201ENST00000358161 7794 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC2.41□□□□□ -2.02
USH2AO75445 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC2.41□□□□□ -2.02
USH2AO75445 TEP1-209ENST00000556935 7643 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
USH2AO75445 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC2.41□□□□□ -2.02
USH2AO75445 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
USH2AO75445 RNU6-1279P-201ENST00000383917 103 ntBASIC2.41□□□□□ -2.02
USH2AO75445 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USH2AO75445 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC2.41□□□□□ -2.02
USH2AO75445 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC2.41□□□□□ -2.02
USH2AO75445 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC2.41□□□□□ -2.02
USH2AO75445 EDDM3DP-201ENST00000554692 434 ntBASIC2.41□□□□□ -2.02
USH2AO75445 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC2.41□□□□□ -2.02
USH2AO75445 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms