Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.49□□□□□ -1.53
SSX4O60224 SNX18P25-201ENST00000510539 758 ntBASIC5.49□□□□□ -1.53
SSX4O60224 AC026782.2-201ENST00000510845 636 ntBASIC5.49□□□□□ -1.53
SSX4O60224 SCARNA5-201ENST00000516201 276 ntBASIC5.49□□□□□ -1.53
SSX4O60224 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX4O60224 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX4O60224 AC008055.1-201ENST00000547032 609 ntBASIC5.49□□□□□ -1.53
SSX4O60224 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX4O60224 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX4O60224 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX4O60224 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX4O60224 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX4O60224 AC084036.1-201ENST00000609190 508 ntBASIC5.49□□□□□ -1.53
SSX4O60224 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX4O60224 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
SSX4O60224 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX4O60224 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.49□□□□□ -1.53
SSX4O60224 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX4O60224 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX4O60224 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
SSX4O60224 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX4O60224 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.49□□□□□ -1.53
SSX4O60224 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSX4O60224 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX4O60224 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX4O60224 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SSX4O60224 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX4O60224 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX4O60224 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX4O60224 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
SSX4O60224 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX4O60224 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX4O60224 AC074141.1-201ENST00000588129 2995 ntBASIC5.48□□□□□ -1.53
SSX4O60224 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX4O60224 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX4O60224 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX4O60224 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX4O60224 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX4O60224 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX4O60224 RPL5P20-201ENST00000403848 896 ntBASIC5.48□□□□□ -1.53
SSX4O60224 RN7SKP151-201ENST00000410230 316 ntBASIC5.48□□□□□ -1.53
SSX4O60224 AL035422.1-201ENST00000414193 397 ntBASIC5.48□□□□□ -1.53
SSX4O60224 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX4O60224 DPPA2P2-201ENST00000418220 897 ntBASIC5.48□□□□□ -1.53
SSX4O60224 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX4O60224 AC013470.3-201ENST00000420252 1194 ntBASIC5.48□□□□□ -1.53
SSX4O60224 AC002127.1-201ENST00000421305 225 ntBASIC5.48□□□□□ -1.53
SSX4O60224 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX4O60224 ZFAND6P1-201ENST00000434138 605 ntBASIC5.48□□□□□ -1.53
SSX4O60224 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX4O60224 MTCO3P43-201ENST00000440974 771 ntBASIC5.48□□□□□ -1.53
SSX4O60224 AL645936.1-201ENST00000441979 518 ntBASIC5.48□□□□□ -1.53
SSX4O60224 AC010240.2-201ENST00000445363 1205 ntBASIC5.48□□□□□ -1.53
SSX4O60224 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX4O60224 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX4O60224 OSTCP1-201ENST00000455507 450 ntBASIC5.48□□□□□ -1.53
SSX4O60224 AC009963.3-201ENST00000458090 486 ntBASIC5.48□□□□□ -1.53
SSX4O60224 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX4O60224 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX4O60224 RFPL4AP3-201ENST00000515267 345 ntBASIC5.48□□□□□ -1.53
SSX4O60224 RNU6-760P-201ENST00000516078 97 ntBASIC5.48□□□□□ -1.53
SSX4O60224 AL133399.1-201ENST00000527476 298 ntBASIC5.48□□□□□ -1.53
SSX4O60224 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX4O60224 TRIM51DP-201ENST00000529746 596 ntBASIC5.48□□□□□ -1.53
SSX4O60224 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX4O60224 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX4O60224 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX4O60224 AC019322.1-201ENST00000571869 389 ntBASIC5.48□□□□□ -1.53
SSX4O60224 OR51C1P-201ENST00000608504 942 ntBASIC5.48□□□□□ -1.53
SSX4O60224 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX4O60224 WBP1LP8-201ENST00000617401 327 ntBASIC5.48□□□□□ -1.53
SSX4O60224 AC073488.6-201ENST00000632293 754 ntBASIC5.48□□□□□ -1.53
SSX4O60224 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX4O60224 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX4O60224 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SSX4O60224 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX4O60224 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX4O60224 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX4O60224 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX4O60224 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX4O60224 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX4O60224 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX4O60224 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SSX4O60224 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX4O60224 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX4O60224 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SSX4O60224 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX4O60224 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SSX4O60224 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SSX4O60224 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX4O60224 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.47□□□□□ -1.53
SSX4O60224 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX4O60224 AC114876.1-201ENST00000490962 1366 ntBASIC5.47□□□□□ -1.53
SSX4O60224 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
SSX4O60224 RNA5SP350-201ENST00000363298 111 ntBASIC5.47□□□□□ -1.53
SSX4O60224 RNA5SP435-201ENST00000364044 108 ntBASIC5.47□□□□□ -1.53
SSX4O60224 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 SEPT7P8-201ENST00000413308 775 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms