Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 RN7SKP275-201ENST00000364626 301 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 RMRPP5-201ENST00000411156 267 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 UBE2V1P9-201ENST00000414760 368 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 VN1R42P-201ENST00000424651 344 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AL160175.1-201ENST00000428124 247 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 HMGB3P5-201ENST00000428894 612 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AL355355.1-201ENST00000442900 793 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 TPT1P3-201ENST00000492841 512 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 IGLVIV-64-201ENST00000518581 301 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 IGKV3D-34-201ENST00000522638 302 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AC118942.1-201ENST00000529674 1035 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AC023968.1-201ENST00000560719 475 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AC021483.2-201ENST00000567415 758 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AC090616.1-201ENST00000583895 447 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AL138895.2-201ENST00000603019 178 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AL445435.1-201ENST00000604232 665 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AC021422.1-201ENST00000621212 473 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AC063952.1-203ENST00000634410 658 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 SEPT7P7-201ENST00000420492 1301 ntBASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AC007114.2-201ENST00000576014 4281 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AC009135.2-201ENST00000624136 1768 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AC104966.1-201ENST00000467010 1464 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 RNU5E-10P-201ENST00000363506 118 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 RN7SKP28-201ENST00000364770 305 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 NPM1P37-201ENST00000403105 874 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AL035422.1-201ENST00000414193 397 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 TCEA1P2-201ENST00000420496 906 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AC115285.1-201ENST00000424879 736 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AC083862.1-201ENST00000427378 1242 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 BX119904.1-201ENST00000432026 348 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 TPTE2P3-201ENST00000441562 1189 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AC069277.2-201ENST00000454211 432 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AC092691.2-201ENST00000461787 803 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 CYCSP20-201ENST00000473154 315 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 FTH1P8-201ENST00000498161 514 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 SETP21-201ENST00000514799 892 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AC090115.2-201ENST00000548060 883 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AC093524.1-201ENST00000564266 1094 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 OOSP1P2-201ENST00000579644 351 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 OR7A19P-201ENST00000608051 733 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 AP000484.1-201ENST00000620067 1252 ntBASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms