Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 BX276092.6-201ENST00000430476 250 ntBASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 AC009963.4-201ENST00000448535 339 ntBASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 BX276092.8-201ENST00000455722 250 ntBASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 Z83838.1-202ENST00000456225 839 ntBASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 AC074386.1-201ENST00000476560 767 ntBASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 RN7SKP238-201ENST00000516483 249 ntBASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 IGKV3D-25-201ENST00000519599 235 ntBASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 IGKV3D-34-201ENST00000522638 302 ntBASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 RPA2P1-201ENST00000556557 721 ntBASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 AC012146.2-201ENST00000576545 416 ntBASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 MIR4776-2-201ENST00000580204 80 ntBASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 AC018690.1-201ENST00000608144 626 ntBASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 AL365181.4-201ENST00000609800 547 ntBASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 AC245014.3-201ENST00000618589 347 ntBASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 AL049634.1-201ENST00000453770 1720 ntBASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.54□□□□□ -1.52
LRTM1Q9HBL6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 AL158827.1-201ENST00000416300 391 ntBASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 NME1P1-201ENST00000420914 382 ntBASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 OR10T1P-201ENST00000424327 947 ntBASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 PNKDP1-201ENST00000435914 430 ntBASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 RPS23P9-201ENST00000448848 438 ntBASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 CFL1P4-201ENST00000451536 498 ntBASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 RPS7P6-201ENST00000485777 579 ntBASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 GAPDHP71-201ENST00000511530 1003 ntBASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 AP003396.4-201ENST00000527574 265 ntBASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 AC090236.2-201ENST00000587933 1101 ntBASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 AL031658.2-201ENST00000616850 651 ntBASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 AC009120.7-201ENST00000623452 780 ntBASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LRTM1Q9HBL6 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 AC104966.1-201ENST00000467010 1464 ntBASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 AL034546.1-201ENST00000623740 3693 ntBASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 CASC19-260ENST00000641828 2001 ntBASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 UGT2B24P-201ENST00000514441 1597 ntBASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 RNFT1P3-201ENST00000340898 1052 ntBASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 RN7SKP185-201ENST00000362813 326 ntBASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.52□□□□□ -1.53
LRTM1Q9HBL6 RN7SKP29-201ENST00000410957 272 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms